Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04867 ATGTACTCAAATCCTCCAATGGATTATGCTTATCATACACCTTCATCTCATCAATGGAGCATTCCTCCAACCTATTCCACACTCACACCAACACCTTCATTTCCATCATTCCCATGGGAACTCTTTACACCTTACTACACTCATGGATCATCATCACCAAATTTGTATCCAAATCATGGATATTCACCACATCCACCTAACCCTAACCCATATTCATCCTACTCATCATCTCCTTATTCATATGACTACAATACTTATTATCAACAACTCCAACCAACAAACACCTCTTTTCACCAATATCAATCTCGTTCTAAAAATAGAGGAAGTTTTGGTAAGAATCTCCAAGTCACTCAGCCCCCTTTTAAGAAAAACTCAAAAAAAGGTTCACAAAAACCTTTGGATCTCAACCTCAAACCACAGATGCAACATTTCATTTCGTTCGTGAGACTAGGCGTAGAAACAAACCTAACCTCACCACACCTCACCAAACCCCAAAGCAACCGCAAAAATGGTCCTTTCAAGCCTCCACCACGTCTTCACCTTCGAGTGCCGTTCCGATCCCGATTTCTCCTCTCTTCCATCACCAAATCCACACCCTATTCTTGCTCCATATCATCGACCAGAAATCTCGACCAACTGGGAAATCTCGACCAGAAAGCTGAAGCTATCATCGTTAAGACTCCTCAATTGAAGCGGAAAAGTGAAGCAACTGGTTTGGAAGCTGATTCAAGTATTAGGGTGACTCATGGATCCACTGAACCAGCCAACAGTTCTTCTCATACGCCGGTATCTGATGTAGGGAACGATAGTAGTTTCGGAAGTGGGAAAAACATTGTCGTGGTAGAGGAGGATGTTGGTTCTGATGAGGGTACCAACTCTGAGTTAAGCAATCAGGAGGAAGACGACTTGCCATCAAAGGTGTCTTCCACGGGAAATTCAGGTTTTCTATCTATTGGCGGTCTCCCGTTATACGCAGAGGACATCTCAGAGGATGGACGCGAAGGGAATGATGTTGAACCACCTTCTTTCAAGGTAAGAATTTCAGGTGCTCTCATTGAGACTTTAATACATACGGTTGCTGCTGGGATTTTGTGTGGTGGAACAACCGAATCAAAAAAACATAGTGACATTGTCAATCGCACAACTGATACGTCAATTTCTCAAATTAAGAGGCTTATTGGGAAGCAGTTTTCGGATGTTGATTTGCAGCGTGATCTTAAGTCTTTGCCTTATAACGTTACTGAAGGAACGGATGGGTATCCGTTGATTCAGGTGAGATACTTGAGGGAAGTTAGGGCGTATACGCCTACGCAAGTGTTTGCGATGATGTTGTCGAATATGAAAGAGATTGCTGAGAATAATCTTAATGCGGCAGTTATTGATTGTTGTATTGTGATTCCGGTTTATTTCACTAATCTTCAGAGGAGGGCTGTTTTAGATGCTGCGACTATTGTTGGGTTGAACCCGCTTCGGTTGCTTCATGAGACTACTGCTAATGCGTGGGCGTATGGGATTTTTAAAACGGATCTGCCTGAGAATGATCAGCTGAATGTGGCCTTTGTGGATATTGAGCATGCTAGTATGCAGGTGTGCTTTGCTGGGTTCAAAAAGGGGCAGCTGAAAGTATTAGCACATTTATACGATAGGTCGTTAGGTGGTAGGGATTTTGATAAGGCTTTGTTTCATCGTTTTGCTGCAAAGTTTAAGGAGGAGTACAAGATCGATGTTTATCAGAATGCCAGGGCTTCTCTGAGGTTGAGGACCGCATGTGAGAAGCTGAAGAAAGTTCTCAGTGCAAATCCCGAGGCACCTTTGAACATTGAATGCTTAATGGATGAGAAGGATGTGAGGGGACATATCAAACGTGATGACTTTGAGCAGCTAGCTCCTCCAATATTGGAACGTGTGAAGGGGCCTTTGGAGAAGGCACTGGCAGAAGCTGGTCTTACAGTTGAGAATATACTCATGGTTGAGGTAGTTGGTTCTGGTTCGCGTGTACCGGCAATTAACAAAATATTGACAGAGTTTTTCAAAAAGGAACCTAGGAGGACAATGACTGCTAGTGAGTGTGTTGCCAGGGGAGCTGCATTGCAGTGTGCTATTCTCAGTCCAATTTTTAAAGTCCGAGAGTTCCAGGTCAATGAAAGCTTTCCCTTCTCTATTTCGCTCTCATGGAAAGGTTCTGGTTCAGATACACAGGTCAATTCACCATACAATAAACAAAGTACCCTTGTTTTCCCCAAGGGAAATTCCATTCCAAGTGTCAAGGTACTGACATTCTTCAAGGCAGGAACCTTTTTTGTTGACGTTCAATGTCATGATCAAAGTGATTTAGAAGCATATCAACGTGCCTTCATTTTTATCCTACAGCTGGCCATGATTTTGAGGGACGCACTTAATACAAAAATTGAGGAAGCTTTTCACAAAGTTTATGAACTTTGGACTAATGCTATCCGTGCTTACGGTTCACAATCTGACTTTAAGCAACTTGCATATCAGTTAACCCAAATAATTTTTGGGGTAGCCCGTCTAGTTCCCATAGCTAGATATATTTCCCTTAGGTTGAGATGCATCTCGATGCTGAACCAGCTTGCTGCTTGCACTCAATCATTTGTACCAGTATCTATGCTTCTTTTGGAAATGCTCGAGATGAAAAAGTTGAGTCGACCCCCTACAGGAGGTGTTGGCAAAGCTGTTGATTTACGCAACATATTGAAGGTTTCTTTTAAAGATTTAAAGTTTATTGCTGGTAATGAGTCTGATAATTCCTATTTGAGCTACTTAATAATGGTTAATCATGAGAAGGTTGGGACATTTCTACAGCTGATAGCCACAGTCATTGGTGGTTTTGTGATAGCATTTACCAAAGGGTGGCTTCTTACTCTTGTTACTCAATGGGATCCGGGAACAATATCTCCACTCTCATATTTATTTTCGAACCTTGAGGACAAGGTTCATGTGAACCCCGCGGCAATGATAGGGAGATTAATAGAATAA 2997 0.4228 MYSNPPMDYAYHTPSSHQWSIPPTYSTLTPTPSFPSFPWELFTPYYTHGSSSPNLYPNHGYSPHPPNPNPYSSYSSSPYSYDYNTYYQQLQPTNTSFHQYQSRSKNRGSFGKNLQVTQPPFKKNSKKGSQKPLDLNLKPQMQHFISFVRLGVETNLTSPHLTKPQSNRKNGPFKPPPRLHLRVPFRSRFLLSSITKSTPYSCSISSTRNLDQLGNLDQKAEAIIVKTPQLKRKSEATGLEADSSIRVTHGSTEPANSSSHTPVSDVGNDSSFGSGKNIVVVEEDVGSDEGTNSELSNQEEDDLPSKVSSTGNSGFLSIGGLPLYAEDISEDGREGNDVEPPSFKVRISGALIETLIHTVAAGILCGGTTESKKHSDIVNRTTDTSISQIKRLIGKQFSDVDLQRDLKSLPYNVTEGTDGYPLIQVRYLREVRAYTPTQVFAMMLSNMKEIAENNLNAAVIDCCIVIPVYFTNLQRRAVLDAATIVGLNPLRLLHETTANAWAYGIFKTDLPENDQLNVAFVDIEHASMQVCFAGFKKGQLKVLAHLYDRSLGGRDFDKALFHRFAAKFKEEYKIDVYQNARASLRLRTACEKLKKVLSANPEAPLNIECLMDEKDVRGHIKRDDFEQLAPPILERVKGPLEKALAEAGLTVENILMVEVVGSGSRVPAINKILTEFFKKEPRRTMTASECVARGAALQCAILSPIFKVREFQVNESFPFSISLSWKGSGSDTQVNSPYNKQSTLVFPKGNSIPSVKVLTFFKAGTFFVDVQCHDQSDLEAYQRAFIFILQLAMILRDALNTKIEEAFHKVYELWTNAIRAYGSQSDFKQLAYQLTQIIFGVARLVPIARYISLRLRCISMLNQLAACTQSFVPVSMLLLEMLEMKKLSRPPTGGVGKAVDLRNILKVSFKDLKFIAGNESDNSYLSYLIMVNHEKVGTFLQLIATVIGGFVIAFTKGWLLTLVTQWDPGTISPLSYLFSNLEDKVHVNPAAMIGRLIE 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04867 998 FunFam Heat shock 70 kDa protein 4 434 521 - -
Vivi6g04867 998 PANTHER HSC70CB, ISOFORM G-RELATED 383 778 - -
Vivi6g04867 998 FunFam Heat shock 70 kDa protein 4 552 635 - -
Vivi6g04867 998 CDD HSPA4_like_NDB 385 703 - -
Vivi6g04867 998 Gene3D - 508 682 - -
Vivi6g04867 998 Gene3D - 436 696 - -
Vivi6g04867 998 PRINTS 70kDa heat shock protein signature 654 670 - -
Vivi6g04867 998 PRINTS 70kDa heat shock protein signature 462 482 - -
Vivi6g04867 998 PRINTS 70kDa heat shock protein signature 685 705 - -
Vivi6g04867 998 MobiDBLite consensus disorder prediction 231 273 - -
Vivi6g04867 998 MobiDBLite consensus disorder prediction 96 133 - -
Vivi6g04867 998 Gene3D - 378 435 - -
Vivi6g04867 998 SUPERFAMILY Actin-like ATPase domain 379 506 IPR043129 -
Vivi6g04867 998 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 707 805 IPR029047 -
Vivi6g04867 998 MobiDBLite consensus disorder prediction 157 179 - -
Vivi6g04867 998 FunFam Heat shock protein 9 387 442 - -
Vivi6g04867 998 MobiDBLite consensus disorder prediction 96 125 - -
Vivi6g04867 998 Pfam Noc2p family 767 913 IPR005343 -
Vivi6g04867 998 Gene3D Actin; Chain A, domain 4 552 635 - -
Vivi6g04867 998 MobiDBLite consensus disorder prediction 286 311 - -
Vivi6g04867 998 Pfam Hsp70 protein 382 759 IPR013126 GO:0005524|GO:0140662
Vivi6g04867 998 SUPERFAMILY Actin-like ATPase domain 517 702 IPR043129 -
Vivi6g04867 998 MobiDBLite consensus disorder prediction 244 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04867 Vivi-Chr6 152573444 152576557 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04867 390 760 Calmodulin-binding Proteins AT1G16030 34.492 2.47e-60 216
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04867 K09489 - gmx:100778196 644.425