Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04863 ATGAGTAAGCGTGAAATGTCGAAGGTGAAGCAGTCGCAGGTTCCTTTGGCTACGTTGATTGGCCGTGAGCTTCGAAATGAGAAAGTTGAAAATCCTTTTGTGAAGTATGGACAGGCTGGATTGGCTAAGAAAGGAGAAGATTACTTTCTGATCAAAACAGATTGCCATAGGGTTCCCGGGGATCCGTCGACCGCGTTTTCTGTTTTTGCGGTTTTTGATGGGCATAACGGTATATCAGCTGCTATTTATGCAAAAGAAAACTTGCTTAATAATGTTTTGAGTGCAATACCGCAAGATATCAGCAGGGATGCATGGCTACAGGCCCTGCCTCGCGCTCTAGTTGTTGGTTTTGTGAAGACTGACACAGAGTTTCAGAAGAAGGGGGAAACCTCTGGAACAACAGTTACATTTGTGCTGGTTGATGGATGGACTGTCACTGTTGCATCTGTTGGTGATTCCCGTTGCATATTGGATACTCAGGGAGGTGTAGTTTCTCTCCTGACAGTTGATCACAGACTTGAAGAGAATGTAGAAGAGAGGGAACGTGTTACTGCTAGTGGTGGTGAAGTAGGAAGACTCAATGTATTTGGGGGAAATGCGGTAGGACCTCTTCGCTGCTGGCCTGGTGGACTTTGCCTATCTAGATCAATAGGAGACACAGATGTGGGAGAGTATATTGTGCCAATACCACATGTTAAACAAGTGAAAGTGAGTTGGTTTCATTATTTCGTTCTTTGTTTGGTGACTCATATGAGCACATTCAGTTCCAAGATGCAATTCTCACAAAATGTTCTTCTCTTGTTTCCTCAGCTTTCAAATGCTGGTGGAAGGCTTATTATAGCCTCTGATGGTATTTGGGATACTATATCGAATGAGACAGCCGCCATGTCATGTCGGGGTCTACCTGCAGAACTTGCTGCCAAGCTAGTAGTTAAGGAAGCTCTAAGATCTAGAGGCTTGAAGGATGATACAACCTGCCTTGTAGTAGATATTATTCCTTCTGACCACCCTGTATTACCACCAACTCCAAGAAAGAAACATAATATGCTAACAGCGCTTCTCTTTAGAAAGAAATCTGAGAACTCTACAAACAAAGCTACGAGCAAGCTTTCTGCAGTTGGTGTTGTGGAGGAGTTATTTGAAGAGGGTTCTGCAATGCTTATAGAAAGGCTTGGTAAGGATTTTCCATTTGATAAGAATTCGGAGATTTTCCGTTGTGCGATTTGCCAAGTGGATCAACCCCCTGGGAATGGTCTATCAGTGAACTCTGGACCTTTCTTTTCTCCAGCATCTAAGCCATGGGAAGGGCCATTTCTCTGCACAAACTGTCGAAAGAAAAAAGATGCCATGGAAGGAAAGAGGCCCAGCTCACATACTGTTACAGCACAGTAA 1392 0.4389 MSKREMSKVKQSQVPLATLIGRELRNEKVENPFVKYGQAGLAKKGEDYFLIKTDCHRVPGDPSTAFSVFAVFDGHNGISAAIYAKENLLNNVLSAIPQDISRDAWLQALPRALVVGFVKTDTEFQKKGETSGTTVTFVLVDGWTVTVASVGDSRCILDTQGGVVSLLTVDHRLEENVEERERVTASGGEVGRLNVFGGNAVGPLRCWPGGLCLSRSIGDTDVGEYIVPIPHVKQVKVSWFHYFVLCLVTHMSTFSSKMQFSQNVLLLFPQLSNAGGRLIIASDGIWDTISNETAAMSCRGLPAELAAKLVVKEALRSRGLKDDTTCLVVDIIPSDHPVLPPTPRKKHNMLTALLFRKKSENSTNKATSKLSAVGVVEELFEEGSAMLIERLGKDFPFDKNSEIFRCAICQVDQPPGNGLSVNSGPFFSPASKPWEGPFLCTNCRKKKDAMEGKRPSSHTVTAQ 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04863 463 SMART PP2C_4 23 329 IPR001932 -
Vivi6g04863 463 CDD PP2Cc 43 331 IPR001932 -
Vivi6g04863 463 SUPERFAMILY PP2C-like 38 331 IPR036457 -
Vivi6g04863 463 Gene3D - 32 335 IPR036457 -
Vivi6g04863 463 PANTHER PROTEIN PHOSPHATASE 44 330 IPR015655 GO:0004722|GO:0006470
Vivi6g04863 463 Pfam Protein phosphatase 2C 62 243 IPR001932 -
Vivi6g04863 463 ProSiteProfiles PPM-type phosphatase domain profile. 32 331 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04863 Vivi-Chr6 152524165 152527257 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04863 1 461 PP2C-type Phosphatase Gene Family AT1G09160 70.499 0.0 647
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04863 - - gmx:100807886 731.095
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04863 6 152524165 152527257 Vivi6g04863 6 152524165 152527257 ECH