Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04861 ATGTCTACCGAACATGTTTTACCGTTCTCTGTTGTTTCTGTCGTTGAGGATGTTCTTCAACAAGGAGCTTCCAAATGTCAGCCGAACAGCGATTTCAAATTTGCTTCCAGAAAAGCCGAAGAAGCTTCTTTGAGAAGGTATGAAGCGGCTGGTTGGTTGAGAAAAACGGTCGGAGTTGTTGGGGGGAAAGACTTACCGGCGGAACCTTCTGAAGAAGCTTTTCGGATTGGTTTGCGTAGTGGGATTATCCTCTGCAATGCTCTTAACAAAATTCAACCTGGAGCAGTGGCCAAGGTGGTTGAAGGTCCTAGCGATTCTGTTATTATTCCTGATGGAGCCGCATTGTCTGCTTTTCAATACTTTGAAAACGTAAGGAACTTTCTTGTAGCGGTAGAAGAAATCGGACTTCCTACCTTTGAAGCTTCTGATTTGGAACAGGGAGGAAAATCTTCGAGAATAGTGAATTGTGTTTTGGCACTCAAGTCCCATGCTGAAGGGAAACTTGGAGGAAGAAGTGGGTCAGGGTCATTGAAATATGGTCAAAAGCCACCTGCACCTGCGAAACCAATGGTGAGGAAAAACTCAGAACCATTCATGAAGTCTCTATGGAGCATGGCAGCAGTTGACAAAGATGGTTACACGAGTGATAACTCTTCGTATAGTGATCTTGGACACGATCGACCTGAAGGGGGTTCATTTTCTTCCTTAAACTCACTCGTTCGCCAATATTTGTCTGATAAGAAGCCTGAGGAGATTCCCATTGTAGTGGAGTCTCTTCTTAACAGAGTCATGGAAGAATTTGAGCGTCGAATGCAAATTCAACAAGAAACGCAAATTCAGCAAGAACCACAAGTTCAACAAGAAACGTTGAAAACAACAACTCAAGAAGATAACGCACCTTCTGAAACGGAACAATCAATTTCAAAAGATGTTTCTGTTGATGAAGAGATGGAAGAAAAAGAGGATGGAGAACAGTTACAAGACAAACAAGAGGAATGCTGTGATGAGAACAGTAACAATGGTGATGCTGAAGAATCAAACAGCTTCAATTTAACGCAGCAAAGTTTAGCCGAGCAACAAAGTAGAATTGTCCAGCAGAGTTTAGTCGAACAACAAAATAGAAGTGTTCAGGAAGTGAAAAACATTGTCCTTCAAACAAAATCCGGAATGAAGTTTCTGCAAAAGGAATACCAGAAGGATATGATCAATCTTAGTAAGCACCTGCGTAGTCTAGCTGCTGCTGCTTCAGGATATCATAAAGTTCTTGACGAAAACCGCAAATTATACAATCAAGTGCAGGATCTGAAAGGAAATATTAGGGTGTACTGTCGAGTTCGACCGTTCTTGGGAGGGCAAGCGAGTCAAAATAGTGTTGTCTGCGGCATCGAGGAAGGAAGTATGTCACTCATGATACCTCCCAATTCCAAACTTGGTAAAGAGGGGAAAAAGACATTTAACTTCAATAAAGTGTTTGGTTCTTCTTCAACACAAGGGGAAGTTTTTGCGGATACACAACCTCTGATTCGTTCTGTTCTCGATGGTTACAATGTTTGTATATTTGCATATGGCCAGACAGGATCAGGAAAAACATACACTATGGCAGGACCAGACAATCTTGACGAGGACACCATTGGTGTGAACTACCGTGCATTGAGAGATCTTTTCTTTCTCTCAGATCAGAGGAAAGACACCATTATCTACGAAATCTCCGTCCAGATGCTTGAGATTTACAATGAGCAAGTCAGAGACCTACTTGCTCCCGAGGGTTCCAACAAAAGATTAGAAATCCGCAATAGTTCCAGCAATGGCATCAACGTGCCAGAAGCGAACCTTGTTCCAGTTTCAACCACTTCCGAAGTCATAAATTTGATGAACTTGGGACATAAAAATCGCGCAGTTGGTTCTACTGCCATGAACGATCGTAGCAGTCGTTCTCACAGCTGCTTGACAGTTCACGTTCATGGAAAGAACTTTGTATCAGGAAGCATTATTCGCGGTTGTATGCATCTTGTCGACCTTGCAGGAAGTGAAAGGGCTGATAAAACCGAGGCCACGGGAGATAGACTTAAAGAGGCTCAACATATCAACAAGTCACTTTCCGCCTTAGGAGATGTAATCGCTTCCCTTGCTCAGAAGAATGCCCATGTTCCATACAGGAACAGCAAACTCACTCAGCTACTTCAGGATGCACTTGGAGGGCAGGCCAAGACCCTGATGTTTGTTCATATGAGTCCCGAACCTGATGCTCTTGGAGAAACACTTAGTACCCTCAAGTTCGCCGAACGTGTCTCCTCCGTTGAACTTGGAGCTGCGCGAGTGAATAAAGATAACACAGAAGTGAAAGATCTTAAAGAACAGATTGCTATGCTAAAGGCAGCCTTAGCAAGGAAAGACGGAGAAGCAGAACACGTTCAGCAACCTACCAATAGTAGCCCTGTAATACCGAGGTTGAAATCCTATGCATCGTCCCCTCCCATGCAGCGTAATGTGACATCTTCTGGAGGCCGTAAGCTGCCAAAAGATGATTCTAGTAGCATAATGGGCCAGAAAAAGAGCGCATCAAAGCTGAAAAGAAGAAGTCTAGATCCTCACGACATGTATAGGAACTCACTACCATGGCCACATGTTAACCATCAAGCCGCAAACGGAAAAGAGGACGACAAAGAATCAGTTTCAGGCGAATGGGTTGATAAGATTCGGATGAACCGGACAGACAGCTTAACTAGCGATGATAGCTTAGTGGAACAATGGGAAGCAGATAATAAAGAATTCTCTCCTATAAGTCCAAGTTCATTTTCAGAAAATTCAAAGTTATGCTTGGAACCCGCGTTCGACATTGCCACAATGACAACAGAAGAATCTGATGAACTTGAAATCGCAACCAGCGATTCTTCAGAATCAGACATGAATTGGCTAATACAAGCACCTAAACCAACCGCGATTTCAAATGGATTAGGCTCTATTAAAGCAAAGAAGTCTATTAATCCAAGACCATCGAAGATCCCCGAAATCAGTAGGAGTATGATTCCATCATTAATTCCTACTCCATCAAAGAAACTACCAATTCCAGTTATTCAAGCAAGAAAGAATCAAGGATCTATTGATGCAAAGAGGAGGAATGGGAATGCAAAGTGA 3135 0.4293 MSTEHVLPFSVVSVVEDVLQQGASKCQPNSDFKFASRKAEEASLRRYEAAGWLRKTVGVVGGKDLPAEPSEEAFRIGLRSGIILCNALNKIQPGAVAKVVEGPSDSVIIPDGAALSAFQYFENVRNFLVAVEEIGLPTFEASDLEQGGKSSRIVNCVLALKSHAEGKLGGRSGSGSLKYGQKPPAPAKPMVRKNSEPFMKSLWSMAAVDKDGYTSDNSSYSDLGHDRPEGGSFSSLNSLVRQYLSDKKPEEIPIVVESLLNRVMEEFERRMQIQQETQIQQEPQVQQETLKTTTQEDNAPSETEQSISKDVSVDEEMEEKEDGEQLQDKQEECCDENSNNGDAEESNSFNLTQQSLAEQQSRIVQQSLVEQQNRSVQEVKNIVLQTKSGMKFLQKEYQKDMINLSKHLRSLAAAASGYHKVLDENRKLYNQVQDLKGNIRVYCRVRPFLGGQASQNSVVCGIEEGSMSLMIPPNSKLGKEGKKTFNFNKVFGSSSTQGEVFADTQPLIRSVLDGYNVCIFAYGQTGSGKTYTMAGPDNLDEDTIGVNYRALRDLFFLSDQRKDTIIYEISVQMLEIYNEQVRDLLAPEGSNKRLEIRNSSSNGINVPEANLVPVSTTSEVINLMNLGHKNRAVGSTAMNDRSSRSHSCLTVHVHGKNFVSGSIIRGCMHLVDLAGSERADKTEATGDRLKEAQHINKSLSALGDVIASLAQKNAHVPYRNSKLTQLLQDALGGQAKTLMFVHMSPEPDALGETLSTLKFAERVSSVELGAARVNKDNTEVKDLKEQIAMLKAALARKDGEAEHVQQPTNSSPVIPRLKSYASSPPMQRNVTSSGGRKLPKDDSSSIMGQKKSASKLKRRSLDPHDMYRNSLPWPHVNHQAANGKEDDKESVSGEWVDKIRMNRTDSLTSDDSLVEQWEADNKEFSPISPSSFSENSKLCLEPAFDIATMTTEESDELEIATSDSSESDMNWLIQAPKPTAISNGLGSIKAKKSINPRPSKIPEISRSMIPSLIPTPSKKLPIPVIQARKNQGSIDAKRRNGNAK 1044
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04861 1044 MobiDBLite consensus disorder prediction 275 346 - -
Vivi6g04861 1044 MobiDBLite consensus disorder prediction 798 891 - -
Vivi6g04861 1044 Gene3D Kinesin motor domain 378 768 IPR036961 -
Vivi6g04861 1044 MobiDBLite consensus disorder prediction 169 192 - -
Vivi6g04861 1044 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 438 801 IPR027417 -
Vivi6g04861 1044 MobiDBLite consensus disorder prediction 275 307 - -
Vivi6g04861 1044 CDD CH_AtKIN14-like 45 162 - -
Vivi6g04861 1044 MobiDBLite consensus disorder prediction 804 851 - -
Vivi6g04861 1044 CDD KISc_C_terminal 436 768 - -
Vivi6g04861 1044 Pfam Kinesin motor domain 444 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04861 1044 SUPERFAMILY Calponin-homology domain, CH-domain 46 168 IPR036872 -
Vivi6g04861 1044 SMART ch_5 45 163 IPR001715 GO:0005515
Vivi6g04861 1044 SMART kinesin_4 436 774 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04861 1044 ProSiteProfiles Kinesin motor domain profile. 438 766 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04861 1044 MobiDBLite consensus disorder prediction 982 1044 - -
Vivi6g04861 1044 ProSiteProfiles Calponin homology (CH) domain profile. 43 165 IPR001715 GO:0005515
Vivi6g04861 1044 PRINTS Kinesin heavy chain signature 514 535 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04861 1044 PRINTS Kinesin heavy chain signature 636 653 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04861 1044 PRINTS Kinesin heavy chain signature 667 685 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04861 1044 PRINTS Kinesin heavy chain signature 716 737 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04861 1044 PANTHER KINESIN-LIKE PROTEIN KLP-3 50 935 IPR027640 GO:0003777|GO:0007018
Vivi6g04861 1044 Gene3D - 35 167 IPR036872 -
Vivi6g04861 1044 Pfam Calponin homology (CH) domain 46 165 IPR001715 GO:0005515
Vivi6g04861 1044 Coils Coil 773 800 - -
Vivi6g04861 1044 FunFam Kinesin-like protein KIN-14I isoform A 433 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04861 Vivi-Chr6 152514331 152520744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04861 426 766 Calmodulin-binding Proteins AT5G65930 40.698 4.67e-75 268