Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04851 ATGGTTTGCCAAGAAGAGTTATTGATTGAAAAAGTGTGTGACTTGTATGAACAAATCTCAAGTCTTGAAACACTCAAACCTTGCAAAAATGTCGACATGCTTTTCACTGAGCTTGTCCTCACATGCATGCCACCTAGTCCTATAGATGTCACAAAACTCCCAAAAACAATTCAAGAAAAAAGGTCACACCTCATAAGGCTATGTGGTGAAGCTGAAGGGTATTTGGAGAGACACTACTCGGCTATTTTAGGTTCATACCAAAACCCTCTTGATCATCTTCATATTTTTCCTTATTACTCTAACTACATCAAACTTGGTCACCTTGAGTTTTCTATCCTTAGCCAACACTGTTCTCATGTCCCTTCCAAAATTGCTTTTATTGGTTCTGGACCTCTTCCCCTTACTTCAATTGTATTGGCATCAAATCATTTACCTTCAACCACTTTTCATAACTATGACATCGACCCTCTGGCTAATTCTAGCGCAGAACATCTGGTGTCATCTGATCCTGACTTGTCAAACCGTATGGTTTTTCACACCAGTGACATATTGGATGTGACTGACGATTTGAAAGAGTTTGAAATTGTTTACCTAGCTGCCCTTGTTGGTATGAACAAGGAAGAGAAGAATCGAATTATTGATCATCTGGAGAAGCACATGGCTCCTGGAGCACTTCTTATGCTAAGGAGTGCTCATGGAGCGCGTGCTTTTCTCTATCCAGTAGTTGAACCTTCTGACCTTCGAGGCTTTGAGGTCCTCTCGATCTTCCACCCTATGGATGAAGTTATCAACTCGGTTGTCATATCGCGTAAGTATCATGTGCCTAAACACTCACTTGATCAAGGCCTTGGTTCCATGATCCTACCAAACAAGTGTTCTGAGATTCAAGTTTTCAATCCTCTTAGGAGCCTCAACCATGGGAATATGATTGAGGAATTGACCATTGAGGATCAACTCATGTGA 963 0.4112 MVCQEELLIEKVCDLYEQISSLETLKPCKNVDMLFTELVLTCMPPSPIDVTKLPKTIQEKRSHLIRLCGEAEGYLERHYSAILGSYQNPLDHLHIFPYYSNYIKLGHLEFSILSQHCSHVPSKIAFIGSGPLPLTSIVLASNHLPSTTFHNYDIDPLANSSAEHLVSSDPDLSNRMVFHTSDILDVTDDLKEFEIVYLAALVGMNKEEKNRIIDHLEKHMAPGALLMLRSAHGARAFLYPVVEPSDLRGFEVLSIFHPMDEVINSVVISRKYHVPKHSLDQGLGSMILPNKCSEIQVFNPLRSLNHGNMIEELTIEDQLM 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04851 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Vivi6g04851 320 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
Vivi6g04851 320 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 122 259 IPR029063 -
Vivi6g04851 320 PANTHER NICOTIANAMINE SYNTHASE 3 4 288 IPR004298 GO:0030410|GO:0030418
Vivi6g04851 320 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04851 Vivi-Chr6 152400116 152401370 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04851 1 314 Nicotianamine Synthase Gene Family AT5G04950 59.875 6.81e-141 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04851 K05953 - gmx:100803630 530.406
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04851 6 152400116 152401370 Vivi6g04851 6 152400116 152401370 ECH