Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04843 ATGGTTTGCCAAGAAGAGTTATTGATTGAAAAAGTGTGTGACTTGTATGAACAAATCTCAAGTCTTGAAACACTCAAACCTTGCAAAAATGTCGACATGCTTTTCACTGAACTTGTCCTCACATGCATGCCACCTAGTCCTATAGATGTCACAAAACTCCCAAAAACAATTCAAGAAAAAAGGTCACACCTCATAAGGCTATGTGGTGAAGCTGAAGGGTATTTGGAGAGACACTACTCAGCTATTTTAGGTTCATACCAAAACCCTCTTGATCATCTTCATATTTTTCCTTATTACTCTAACTACATCAAACTTGGTCACCTTGAGTTTTCTATCCTTAGCCAACACTGTTCTCATGTCCCTTCCAAAATTGCTTTTATTGGTTCTGGACCTCTTCCCCTTACCTCAATTGTATTGGCATCAAATCATTTACCTTCAACCACTTTTCATAACTACGACATCGACCCTCTGGCTAATTCTAGCGCAGAGCATCTGGTGTCATCTGATCCTGACTTGTCAAACCGTATGGTTTTTCACACCAATGACATATTGGACGTGACTGATGATTTGAAAGAGTTTGAAATTGTTTACCTAGCTGCCCTTGTTGGTATGAACAAGGAGGAGAAGAATCGAATTATTGATCATCTGGAGAAGCACATGGCTCCTGGAGCACTTCTTATGCTAAGGAGTGCTCATGGAGCGCGTGCTTTTCTCTATCCAGTAGTTGAACCTTCTGACCTTCGAGGCTTTGAGGTCCTCTCGATCTTCCACCCTATGGATGAAGTTATCAACTCGGTTGTCATATCGCGTAAGTATCATGTGCCTAAACACTCACTTGATCAAGGCCTTGGTTCCATGATCCTACCAAACAAGTGCTCTGAGATTCAAGTTTTCAATCCTCTTAGGAGCCTCAACCATGGAAATATGATTGAGGAATTGACCATTGAGGATCAACTCATGTGA 963 0.4123 MVCQEELLIEKVCDLYEQISSLETLKPCKNVDMLFTELVLTCMPPSPIDVTKLPKTIQEKRSHLIRLCGEAEGYLERHYSAILGSYQNPLDHLHIFPYYSNYIKLGHLEFSILSQHCSHVPSKIAFIGSGPLPLTSIVLASNHLPSTTFHNYDIDPLANSSAEHLVSSDPDLSNRMVFHTNDILDVTDDLKEFEIVYLAALVGMNKEEKNRIIDHLEKHMAPGALLMLRSAHGARAFLYPVVEPSDLRGFEVLSIFHPMDEVINSVVISRKYHVPKHSLDQGLGSMILPNKCSEIQVFNPLRSLNHGNMIEELTIEDQLM 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04843 320 Gene3D Vaccinia Virus protein VP39 6 273 IPR029063 -
Vivi6g04843 320 PANTHER NICOTIANAMINE SYNTHASE 3 4 288 IPR004298 GO:0030410|GO:0030418
Vivi6g04843 320 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410|GO:0030418
Vivi6g04843 320 Pfam Nicotianamine synthase protein 5 273 IPR004298 GO:0030410|GO:0030418
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04843 Vivi-Chr6 152325866 152327123 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04843 1 314 Nicotianamine Synthase Gene Family AT5G04950 59.875 1.37e-140 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04843 K05953 - gmx:100803630 532.332