LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vivi6g04832	ATGGGTTTTGCTAGTTTTATTCCATGCATTTTTATGCTTATTAATCAACTAGCATATTCTGGGATGAACGTTACGTCCAAGCTTGCAATTGTTGGAGGAATGAACCCACTAGTCCTTGTGGCTTATAGGCAAATTTTTGGAACTGTGGCCATAGCTCCATTTGCTTATTGGCTTGAACGTGATATAGTTCCAAGGATGACAAAGCGTATAATGATACAAATATTTCTATCTTCAGTAACAGGGGTCACAGGAAATCAGGTTCTATATTTTGTGGGACTAAAATATTCAACGGCCACAATTGCTTGTGCTCTAACAAATTTGCTGCCAGCTTTCACATTTGTCCTTGCAGTCCTCTTCAGGCAAGAGAATTTGGGCATAAGGACGAAAAGAGGTATAGCAAAGGTGGTAGGAACAATGTTGTGTGTGGGAGGAGCAATCTTGTTATCATTCTACCATGGTCAAGTGATTGGAATTGGCCAATCAAGTATCCACTGGAGCTATGCCGAGAAGCTTCAAAGTGGTGGTGATAGCTCTGGTTCTTCGGGAAGCTCGCTTCTAGGCCCTGTTCTCTTGATTCTTAGTGCTCTCATTTGGTCCTTATGGTTCATAATTCAAGCGGATATGAGCAAGAATTTTCCAGTGCCATATACAAGCACAACCTACATGTGTTTCTTGGCCAGCATCCAGTGTGTGTTCATAGCTTTGTGTTTTGATCATAGTGCTTCGTCTTGGTCACTCCGTAATGCTATGAGAATTGTCTCTTCTGTTTACACGGGAGTAATTTGCACCGCACTGACATATTGTTTGATATCATGGACGATAGAGAGAAAAGGGCCGCTTTATGTGTCCGTATTCACTCCACTGCAGCTTATTCTTACCGCGATTATTAGCTGGGCTTTTCTCAGTGAACAGTTATACCTTGGCACTGCACTTGGGTCATTGCTGATTGTTTTCGGGCTTTATGGTGTGCTATGGGGTAAGAGCCAGGAAGCTGATACCAACAAACTGGAAGAGGCTAGTGATCAAGATGAAGGTGTTAAGAGAGATGATATGGAGATGCAGTCTTACGTAATGCCATTATCCAATGGTAATGGTCATGGTCATAGTAATGGTAATGGTAATGGTCACATGTGA	1134	0.4215	MGFASFIPCIFMLINQLAYSGMNVTSKLAIVGGMNPLVLVAYRQIFGTVAIAPFAYWLERDIVPRMTKRIMIQIFLSSVTGVTGNQVLYFVGLKYSTATIACALTNLLPAFTFVLAVLFRQENLGIRTKRGIAKVVGTMLCVGGAILLSFYHGQVIGIGQSSIHWSYAEKLQSGGDSSGSSGSSLLGPVLLILSALIWSLWFIIQADMSKNFPVPYTSTTYMCFLASIQCVFIALCFDHSASSWSLRNAMRIVSSVYTGVICTALTYCLISWTIERKGPLYVSVFTPLQLILTAIISWAFLSEQLYLGTALGSLLIVFGLYGVLWGKSQEADTNKLEEASDQDEGVKRDDMEMQSYVMPLSNGNGHGHSNGNGNGHM	377

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vivi6g04832	377	PANTHER	WAT1-RELATED PROTEIN	8	337	IPR030184	GO:0016020\|GO:0022857
	Vivi6g04832	377	Pfam	EamA-like transporter family	7	149	IPR000620	GO:0016020
	Vivi6g04832	377	Pfam	EamA-like transporter family	186	324	IPR000620	GO:0016020
	Vivi6g04832	377	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	222	328	-	-
	Vivi6g04832	377	SUPERFAMILY	Multidrug resistance efflux transporter EmrE	42	150	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vivi6g04832	Vivi-Chr6	152158045	152160840	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Vivi6g04832	1	370	Nodulin-like Gene Family	AT1G09380	53.351	3.39e-142	407