Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04815 ATGGAGAAAAAACGTTCCAAGGGAAGTTTCCTTAGTTTGTTTGATTGGAATGCCAAATCTCGGAAGAAGCTTGTTTGGAACAATCCAACCTTACCTGAGGTTTCAAAGCATGGAAAGGAAAATCTAGAGAATTTGCCAGACTCGCAGTTCTATAGGATAAAGGGGGATGAGAATGGAGCAAGTCCGAGTGATATTGCAAGTAGTGATTTTAACTGCGCCGTATCAGGTTGTAGTGATGAAGGGTGTGGTAGTAAAGCCCCTGGGTTAGTAGCAAGACTCATGGGTTTGGATTCGTTGCCGACTTCAGAAGTCGGTGAGCTTTCCGGCGCTTCATTTTACAGCTCCAACTCTCATGGAGGTTCTCGTTATAATGCGGGTGATCTTCGTTTCACAGATGACTTCCGTCGCGCCGACTACTTAAACACACCACTTAAGCTGGAGAAGTCTTCTTGGGATGCCATGGAATCAAAGGCACGTAAAATGGAAAACCGGCCAATGAAGAGATTTCAAACTGAAATGTTGCCTCCAAAGTCGGCTAAACCCATTCCCGTTACTCACAATAGATTATTGTCTCCCATCAAGAGTAATGGTTTTCTGCCGTCGAAGAATGCAGCTCACATAATGGAGGCGGCTGCCAAAATAATTGATGGAAGCCCTCAGCCATATACGAGGAATCGAATGCTATCATCCGGGTCTTCATCTGTTCCCATAAGAATTCTTGATTTGAAAGAGAGATTGGAAGCTGCACAATATGCACCCGGAAAGCTAGCGGATCAGAACAATACCAACCCTTCAAATTACAAACCTAGTGAGAGGAGCTCTAATCTGTACAAGTCTACATCGGCATTCAAGGGTTCAAGAGATTCTGAAAAACGAAGTTCGTGTCATTTAACAAGTAAAGGAAAATCAGGTTCTCTTGCAATGGCATCAAAAACCAATGCTCAAAGCCGAGATACATTGGTTTCAAATGGAAATAGGAAATATATGAGGCAGAAAGAACAGAATGATATAAAGTCAAACCAGCCCACAAGGAACCAGAAATCAATTGTAAACCGAGCGTTGCCGCAGAAAACAAATGCAAAACGTAATAGCAATGTGCTGGTACAGAATGATCAAAAGCAAAACAGCATGATTTCTAAAGGTAAATCAGCCTCGAAAATAGATTCAAACAAGCCAACAACACGAGGTTCTTCTTCTGAAAGTTCTACTGGAATCAGAAAGGCAACAAACAAGGGTGCTACAAATGTCAATCTTCCGCCTAAAAGGTCAAGCTCTAGGGCAACTGATAACCGAAAGGAGTTTCCCCCGTCCAAATCACAAAGTGTTTCCCAAAAGAAAAAGTATAACAGCAGAAGTGTTCACGAGGCAAGAAGTCCTGATCATGCAAGAAATGATTGCGAAAGCAAGTCCATAAAATGCAATTTTACAACTGATGGAAGTGTTGCTCAGAATGCATTTAACATGAATGAAAGCAGTGATGTTATTTCATTTACATTTACTTCTCCCTTGAGGAAAAACACGGTGGAGACACTATCCTCTTCTGACCAAGTGACGGAAACCAGAACTAGATTTGGTGTCGACTCTCTTGGGCATAGTGATAATCTTCATCCCAAAAAATTATCACTATCTCCGACACATATGATAGATAGTGATGCATTGAGTGTTCTGTTGGAGCAAAAGCTGCAAGAGTTAACATCGAGACTTAACTTGCCTCAATGTACCCTAGCCTCGGAAGAGCCTTCTACTGGTTTGAAATCTAGTTTGCAAGATAAAACATCCAGTATGGTAAACACCACAGCTAAGGAACAGGATGAAATGTTCAGTGATGAACTTAATAGAATGCATAGCTATCGATTTTATTCAAGTGATGAGCCAGCGCTTAACATGAATCAGCAACTGCAGACATTGGAATTAAGGGAAGATCCTAGGTATAGCAGCAACAATGAAAGTGGAAATGATCTAGGTTGTCAACATTCCAACGCGGATACAAACTTTCAAGCTCCTTCTGTCAGTGAAAGTTACATGGATAGTGAAGACAGTACATACGGCAGCACGGTTTATTCTTCCATGCAAGATGAAGAAGTATCTAATATTTCCCAGATAAACAACGGGTCTGAATCATTTGAAAATGAAGTGACTTCGTCAGAGCAAAGCTCTTCCGTATCTACCGTGCGCAACATGTCTGTCACACAAATAATCAGAATACCGAACATGGTAGATTTTAAAAGATCAGGCATTATGGAACTTGATTATGTACATAACATACTCAGCAATGCAGAGTTTCTGGCAGAAGAATTCATCATGGGTCGAACTAGCACTGTCATAATGCCAAATCTCTTCGATCTGTTGGAGAATCATAGTACCGGAACAACAACATATTGTGGAGAGGAAGAGTACTCTAAGCTTGAAAGGAAGGTTTTATTCGACTATGTGAGTGAATGCTTAGAGTTGAGATGTGAAAAAGCTTTTGTTGGAACTTGCAAATCAAGGCCTAGATGGATGACATCGACGACTCAGAGGAAGAACATGTTGGCAGAAGAATTGTACAAAGAGATGTTGAGTTTTAGGAACATGGAAGATGTTATGGCAGATGAACTTTTGAGCAATGACATGAGTAATGGATATGGGAAATGGCTTGACTTTGAAATTGAAGCATTTGAAGAAGGGTTAGAGGTTGAAGAGGACATACTAGAATCTTTGATTGATGAATTGGTTTCTGATTTGTTGGTTCTTTAG 2736 0.4083 MEKKRSKGSFLSLFDWNAKSRKKLVWNNPTLPEVSKHGKENLENLPDSQFYRIKGDENGASPSDIASSDFNCAVSGCSDEGCGSKAPGLVARLMGLDSLPTSEVGELSGASFYSSNSHGGSRYNAGDLRFTDDFRRADYLNTPLKLEKSSWDAMESKARKMENRPMKRFQTEMLPPKSAKPIPVTHNRLLSPIKSNGFLPSKNAAHIMEAAAKIIDGSPQPYTRNRMLSSGSSSVPIRILDLKERLEAAQYAPGKLADQNNTNPSNYKPSERSSNLYKSTSAFKGSRDSEKRSSCHLTSKGKSGSLAMASKTNAQSRDTLVSNGNRKYMRQKEQNDIKSNQPTRNQKSIVNRALPQKTNAKRNSNVLVQNDQKQNSMISKGKSASKIDSNKPTTRGSSSESSTGIRKATNKGATNVNLPPKRSSSRATDNRKEFPPSKSQSVSQKKKYNSRSVHEARSPDHARNDCESKSIKCNFTTDGSVAQNAFNMNESSDVISFTFTSPLRKNTVETLSSSDQVTETRTRFGVDSLGHSDNLHPKKLSLSPTHMIDSDALSVLLEQKLQELTSRLNLPQCTLASEEPSTGLKSSLQDKTSSMVNTTAKEQDEMFSDELNRMHSYRFYSSDEPALNMNQQLQTLELREDPRYSSNNESGNDLGCQHSNADTNFQAPSVSESYMDSEDSTYGSTVYSSMQDEEVSNISQINNGSESFENEVTSSEQSSSVSTVRNMSVTQIIRIPNMVDFKRSGIMELDYVHNILSNAEFLAEEFIMGRTSTVIMPNLFDLLENHSTGTTTYCGEEEYSKLERKVLFDYVSECLELRCEKAFVGTCKSRPRWMTSTTQRKNMLAEELYKEMLSFRNMEDVMADELLSNDMSNGYGKWLDFEIEAFEEGLEVEEDILESLIDELVSDLLVL 911
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04815 911 MobiDBLite consensus disorder prediction 332 466 - -
Vivi6g04815 911 Coils Coil 883 903 - -
Vivi6g04815 911 MobiDBLite consensus disorder prediction 448 466 - -
Vivi6g04815 911 MobiDBLite consensus disorder prediction 335 424 - -
Vivi6g04815 911 MobiDBLite consensus disorder prediction 255 283 - -
Vivi6g04815 911 MobiDBLite consensus disorder prediction 642 661 - -
Vivi6g04815 911 MobiDBLite consensus disorder prediction 298 318 - -
Vivi6g04815 911 MobiDBLite consensus disorder prediction 251 318 - -
Vivi6g04815 911 Pfam DUF761-associated sequence motif 78 103 IPR032795 -
Vivi6g04815 911 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 2 907 - -
Vivi6g04815 911 Pfam Domain of unknown function (DUF4378) 748 903 IPR025486 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04815 Vivi-Chr6 151930863 151935630 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04815 1 909 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.526 3.02e-103 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04815 - - tpra:123890979 1340.48