Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04813 ATGTGTGTTGAAATTTTTATAAATATAGCCACTTTTCTCAACTTATTCGCATCACTTCTTATCACTCTTCTTTTCAAAAAAAAAAATTCTTATCACTCTTACTTGAGAGATTATCTTTCTGAGATCTGGAAAAGTAAATTACATAATTTTGCGATGGTATCAAAAAAGCAATCTCGTAAGATTCCTAGTCATGTGCCGAAACGGAATCTTGGTGTTACAAAACAAGCAACAAATAGAGAAAAGATTAATGAAGGTGGAAAATCTGGAGCCAGATCCTTAGAGTTGCGTTTTGATAATGATGATAAGTTGCCAGATACAACTTTTACTAAAACCAATATAATTCAAAAAGATGAACCGCTTCAAGTTGCATTATTTGATGTTAGATCTAAGTCAATAGTCAACGATGGTCCTTTCTCTTCAATAAAGATACAGATCTGTCCTATCAAGAGTGAGTTTAAATCTTGTGATGATGAAGATTGGACTGAAGCTGAATTCAAGGATAATATCTTGCGTGAAAGAGAGAATAAAGAGCCATTGTTGGTTGGAGATAGGTTTGTTACTCTTAAAAATGGAGTTGCTTCTATTTATAAAATCATGTTCACTGATAATTCTGGATGGGTGAGAGACAAAAAGTTCAGTTTGGGAGCAAAAGCTATGAAAAATGGAGAGATTATTAAGGAAGGTAGAAGTCAGGCTTTAATTAGGGTCAAAGATGGCAGAGGAGAATCTTACAAGAAACACTATCCTCCATACTTGAAGTTGAAGGATGATGTGTGGCGTTTGAAGAAAATAGCTAAAAATGGACCGTTCCACAAGCGACTCCGTAACAACGAAATTCATAATGTTAAGGATCTGTTGAGGTTACTCATAACCAATGAATCTTCACTACGTGAGAAATTTGAAAAAATTCAGAACAAGTCCTGGTCTGATATTATAGAACATGCCCGGTCCTGTGTTGTAGATGATTACATGCTTTACAGCTATGAGATGATTGGACAACCGGTACTGCTGCTGTTCAATGTGATCTATGAACTTGTTGCTGTCACATTTGGTGAACAAAAGTTTTATTTACCAGATGATCTCACACTCACACCCATTCAGAAGAATTTGATAGAAATTGTGAAGAAAGATGCATACAAAAACATTGAAAATTTAAAAGCAATTGATGAGGGTACATTGAACTCCATAAGTTTAGAAGCATGTATAAAATCAACACAAGATCTGCAAGGTTATGTTGAACCATTTATCTCTAGTTCAAATGTTAATGATGGAATGCAAAATGTTCAAATCAATGTTGATCCAGTGGCAGACACTAGAGAAATACCACAAAACAATTATGGTGATTCAACATATGTCGTCATTCCTGAGCCAGATTATGATGTTTCATTTGGTTATTTTGATGGAGATGAGCTTAGCACTTTCTTTGATTTTCTGAGTTCTGATATGGATATTAATGGAGATATAGGTTAG 1470 0.3449 MCVEIFINIATFLNLFASLLITLLFKKKNSYHSYLRDYLSEIWKSKLHNFAMVSKKQSRKIPSHVPKRNLGVTKQATNREKINEGGKSGARSLELRFDNDDKLPDTTFTKTNIIQKDEPLQVALFDVRSKSIVNDGPFSSIKIQICPIKSEFKSCDDEDWTEAEFKDNILRERENKEPLLVGDRFVTLKNGVASIYKIMFTDNSGWVRDKKFSLGAKAMKNGEIIKEGRSQALIRVKDGRGESYKKHYPPYLKLKDDVWRLKKIAKNGPFHKRLRNNEIHNVKDLLRLLITNESSLREKFEKIQNKSWSDIIEHARSCVVDDYMLYSYEMIGQPVLLLFNVIYELVAVTFGEQKFYLPDDLTLTPIQKNLIEIVKKDAYKNIENLKAIDEGTLNSISLEACIKSTQDLQGYVEPFISSSNVNDGMQNVQINVDPVADTREIPQNNYGDSTYVVIPEPDYDVSFGYFDGDELSTFFDFLSSDMDINGDIG 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04813 489 Pfam Calmodulin binding protein C-terminal domain 325 386 IPR046829 -
Vivi6g04813 489 Pfam Calmodulin binding protein-like N-terminal domain 93 238 IPR046831 -
Vivi6g04813 489 PANTHER OS02G0177800 PROTEIN 52 419 IPR012416 GO:0005516
Vivi6g04813 489 Pfam Calmodulin binding protein central domain 254 318 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04813 Vivi-Chr6 151906254 151915342 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04813 52 381 Calmodulin-binding Proteins AT5G57580 37.425 2.26e-62 213