Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04812 ATGGTATCTGATAATCAATTTCGTAGGATTCCTAGTCTTGGGTCGAAACGGAACCTTGGTGTTACAAAACAAGCATCAAATAGTGGCCTTCAATATGTGTTTAACACTCTAAGGATGAATGCTCATGATTCCCACCTCATGGAATCTTTCATTCGAGGGGTGGTAAGAGATGTGGTGGAAGAAAAAATCCAAGAGCGTCTCCGCTCAAGAGAAAATGTTAATGAAGGTGGAAAATCTGGAGCCAGATCCTTAGAGTTGCGTTTTATTAATAATAATAAGTTGCCAAAAACGACTTTTACTAAAACCAATATAATTCCCAATGATGAACCACTTCAAGTTGCATTATTTGATGTTAGATCTAAGTCAATAGTCAATGAGGGTCCCTTGTCCTCAATGAAGATACAGATTTTTCCTATCCAGGGAAAGTTTGAATCTGTTGATGATGAAGATTGGACTGAAACTGAGTTCAATAATAATATCTTGCATGAAAGAAAGAATAAAGAGCCACTGTTGGATGGAGATAGGTTTGTTACTCTTGAAAATGGAGTTGCTTCTATTTCTGAAATCAAGTTCACTGATAATTCTGGATGGGCAAGAAACAAAAAGTTCAGCTTAGGAGCAAAAGCTATGAAGAATGGAGAGAATATTAAGGAAGGTAGAAGTCAAGCTTTTAGGGTCAAAGATGTCAGAGGAGAAGCTTACAAGAAACATTATCCTCCATTCTTGAACGATGATGTGTGGCGTTTGAAGAAAATTTCTGAAAATGGACCATTCCGCGACCGACTCCGTAGCAACGGAATTCATACTGTTAAGGATCTACTGAGGTTACTCATAACCAATGAATCTTCATTACATGAGAAATTTGAAAAAATTCAGAAGAAGTGCTGGTGTGATATTATAGAACATGCCCGATCGTGTGTTGTAGATGATACCATGCTTTACAGCTATGAGATGATTGGACAACCAGTACTGCTGCTGTTCAATGTGATCTATGAACTTGTTGCTGTGACATTTGATGCACAAAAGTTTTATTTACCGGATGATCTCACACTCACTCCGAACCAGAAGAAATTGGTAGAGATTGTGAAGCAAGATGCATACAAAAACATTGGAAATTTAAGAGAAATTGATGAGGCTGTATTGAACTCCATAAGCTTAGAAGCACGTATAAAATCAACACAGGATCTGCAAGGTTATGTTGAACCATTTATCTCTAGTTCAAATGTTAATGATGGAATGCAAAATGTTGAGATCAATATTGATCCGGTTCCAGACATAAGAGAAATACCAGGAAACAATTATGATGTTTCATTTGGTAATTTTGATGAAGCTGAGTGTAGCACTTTGGTTGATTTCCTCAATTCTGATATGAATATTACATCCAACAGTGAGAAACCAAAAGCAGTGTGGTGTAAGATTCGTGCTGTTGTCAAATGGAGAATATCAGGGAAAACAAGAGTTGCAGCTGCCAAGAAGAATGAACATTTGCCTATTTATAAGGTTTATGATATCAGTGCTATTTTCTAA 1527 0.3687 MVSDNQFRRIPSLGSKRNLGVTKQASNSGLQYVFNTLRMNAHDSHLMESFIRGVVRDVVEEKIQERLRSRENVNEGGKSGARSLELRFINNNKLPKTTFTKTNIIPNDEPLQVALFDVRSKSIVNEGPLSSMKIQIFPIQGKFESVDDEDWTETEFNNNILHERKNKEPLLDGDRFVTLENGVASISEIKFTDNSGWARNKKFSLGAKAMKNGENIKEGRSQAFRVKDVRGEAYKKHYPPFLNDDVWRLKKISENGPFRDRLRSNGIHTVKDLLRLLITNESSLHEKFEKIQKKCWCDIIEHARSCVVDDTMLYSYEMIGQPVLLLFNVIYELVAVTFDAQKFYLPDDLTLTPNQKKLVEIVKQDAYKNIGNLREIDEAVLNSISLEARIKSTQDLQGYVEPFISSSNVNDGMQNVEINIDPVPDIREIPGNNYDVSFGNFDEAECSTLVDFLNSDMNITSNSEKPKAVWCKIRAVVKWRISGKTRVAAAKKNEHLPIYKVYDISAIF 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04812 508 PANTHER OS02G0177800 PROTEIN 34 411 IPR012416 GO:0005516
Vivi6g04812 508 Pfam Calmodulin binding protein C-terminal domain 313 376 IPR046829 -
Vivi6g04812 508 Pfam Calmodulin binding protein central domain 242 306 IPR046830 -
Vivi6g04812 508 Pfam Calmodulin binding protein-like N-terminal domain 84 228 IPR046831 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04812 Vivi-Chr6 151882209 151885167 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04812 47 378 Calmodulin-binding Proteins AT5G26920 38.643 1.89e-66 219