Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04810 ATGGTATCAGATAATCATTTTCTTAGGATTCCTAGTCATGGCTCGAAATGGAATCTTGGTGTTACAAATCAAACATCAAACAGTGGCCTTAAAAAAATGATTAACGCTCTAAAGATGAACGGTCACGATTCCCTCATGGAATCTTTCTTTCGAGGAGTGGTAAGAGATGAGGTTGAAAGAAAACTCCAAGAGCTCTTATTTTCTAGAGAGAAGATTAATGAAGGTGGAAGATCTAGAGCCAGATCCTTAGAGTTGTGTTTTATTAATAATAATAAGTTGCCAATTATGACTTTTACTAAAACTAATATCATTCCAAAGGATGAACCTTTTCAAGTTGCACTACTTGATGTTAGATCTAAGTCAATAGTCAACGAGGGTCCTTTGTCTTCAATGAAGATAGAGATTTGTCCCATCAAGAGTGTGTTTGAATCTTGTGATGATGAAGATTGGACTGAAAATGAATTCAAGGATAATATCTTGCATGAAAGAAAGAATAAAGAGCCATTGTTGGATGGAGATAGGTTTGTTACTCTTGAAAATGGAGTTGGGTCTATTTCTAAAATCATTTTCACTGATAATTCTGGATGGGTAAGAAACAAAAAGTTCAGTTTGGGAGCAAAAGCTATGGAAAATGGAGATATTATTAAGGAAGGTAGAAGTCAAGCTTTTAGGGTCAAAGATGTTAGAGGAGAATCTTACAAAAAACACTATCCCCCGTTGTTGAACGATGAAGTGTGGCGTTTGGAGAAAATTGCTGAAAACGGAAAATTCCGCGAACGACTTAATATTAACGAAATTCATACGGTTAAGGATCTCTTGAGGTTACTCATGGTCAATGGGTCTTCATTGCATAAGAAATTTGGCAAAATTCAGAAGAAGTGTTGGTTAGCAATTGTTGAACATGCCCGATCGTGTGTGGTAGATGATTACAAGCTTTACTGCTATGAGATAATTGGACAACCAATACTGCTGCTGTTCAATGTCATCTATGAACTTGTCGGTGTGACATTTGGTGAACAAAAGTTTTATTTACCGGATGATCTCACACTCACTCCGAACCAGAAGAATTCGGTAGAGATTGTGAAGCAAGATGCATACAAAAACATTGGAAATTTAAGAGAAATTGATGAGGCTGTATTGAACTCCATAAGCTTAGAAGCACGTATAAAATCAACACAGGATCTGCAAGGTTATGTTGAACCATTTATCTCTAGTTCAAATGTTAATGATAGAATGCAAAATGTTGAAATCAATGTTGATCCGGTTCCAGACATAAGAGAAATACCAGGAAACAATTATGATGTTTCATTTGGTAATTTTGATGAAGCTGAGTGTAGCACTTTGGTTGATTTACTGAATTCTGAGATGGATATTACATCAAACAGTGAGAAACCAAAAGCAGTGTGGTGTAAGATTCGTGCTGTTGTCAAATGGAGAATATCAGGGAAGAGAAGAGTTGCAGCTGCCAAGAAGAATGAACAATTGTCTGTTTATAAGGTTTATGATATCAGTGCTATTGTCTAA 1524 0.3602 MVSDNHFLRIPSHGSKWNLGVTNQTSNSGLKKMINALKMNGHDSLMESFFRGVVRDEVERKLQELLFSREKINEGGRSRARSLELCFINNNKLPIMTFTKTNIIPKDEPFQVALLDVRSKSIVNEGPLSSMKIEICPIKSVFESCDDEDWTENEFKDNILHERKNKEPLLDGDRFVTLENGVGSISKIIFTDNSGWVRNKKFSLGAKAMENGDIIKEGRSQAFRVKDVRGESYKKHYPPLLNDEVWRLEKIAENGKFRERLNINEIHTVKDLLRLLMVNGSSLHKKFGKIQKKCWLAIVEHARSCVVDDYKLYCYEIIGQPILLLFNVIYELVGVTFGEQKFYLPDDLTLTPNQKNSVEIVKQDAYKNIGNLREIDEAVLNSISLEARIKSTQDLQGYVEPFISSSNVNDRMQNVEINVDPVPDIREIPGNNYDVSFGNFDEAECSTLVDLLNSEMDITSNSEKPKAVWCKIRAVVKWRISGKRRVAAAKKNEQLSVYKVYDISAIV 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04810 507 PANTHER OS02G0177800 PROTEIN 31 414 IPR012416 GO:0005516
Vivi6g04810 507 Pfam Calmodulin binding protein-like N-terminal domain 83 227 IPR046831 -
Vivi6g04810 507 Pfam Calmodulin binding protein C-terminal domain 311 375 IPR046829 -
Vivi6g04810 507 Pfam Calmodulin binding protein central domain 241 305 IPR046830 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04810 Vivi-Chr6 151803556 151806178 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04810 46 377 Calmodulin-binding Proteins AT5G26920 41.298 1.53e-72 234