Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04807 ATGGTATCGGGTAAGCAAGCTCGTAAGGATCACAAAGGAAGTAGTAATAAAATTCCTAGTCTTGGGTCGAAACGGAATCATGGTGTTACAAAACAAGCATCAAATAGCCTTAAATATAGGATTAAAAGGATGAATGCTCATGATTCACTCCTCATGAAATCTTTCATTCGAGGAGTGGTAAAATATGAGGTTGAAAGAAAATTCCAAGAGCTCTTAATTTCAAGAGAAAAGATTTATGAAGGTGGAAAATCTGGAGCTAGAGCCTTAGAGTTGCGTTTTATTAATAATAATAAGTTGCCAAATACGACTTTTACTAAAACCAATATAATTTCAAAGGATGAAGCACTTCAAGTTGCATTATTTGATGTTAGATCTAAGTCAATAGTCAATGAGGGTCCCTTGTCTTCAATAAAGATAGAGATTTGTCCCATCAAGGGTGATTTTGAATCTTGTGATGATGAAGATTGGACTGAAGCTGAGTTCAGTGATAATATATTGCATGAAAGAGAGAATAAAGAGCCATTGTTGGTTGGAGATAGGTTTGTTACTCTTGAAAATGGAGTTGCTTCTATTTCTAAAATCATGTTCACTGATAATTCTGGATGGGTGAGAGGCAAAAAGTTCAGTTTGGGAGCAAAAGCTATGAAAAATGGAGAGAATATTAAGGAAGGTAGAAGTCAAGCTTTTAGGGTCAAAGATATCAGAGGAGAAGCTTACAAGAAACATTATCCTCCATTCTTGAACGATGATGTGTGGCGTTTGAAGCTAATTGCTGAAAATGGACCATTCCACGACCGACTCCGTAGCAACGGAATTCATACTGTTAAGGATCTCTTGAGGTTACTGATAGTCAATGAATCTTCATTACGTGAGAAATTTGGACAAATTCAGAAGAAGTGCTGGTTAGCGATTGTTGAACATGCCCGATCGTGTGTGGTAGATGATTATAAGCTTTACAGCTATGAGATAATTGGACAACCAATACTGCTTCTGTTCAATGTGATCTATGAACTTGTTGGTGTGACATTTGATTCACGAGAGTTTTATTCACCAGATGATCTCACACTCACACCCAACCAGAAGAATTTGGTAGAAATTGTGAAGCAAGATGCATACAAAAACATTGGAAATTTAAGAGCAGTTGATGAGGGTATATTGAACTCCATAAGCTTAGAAGCATGTATAAAATCAACACAAGAACAAGATCTGCAACATCTTGAAATCTCTGTAGCAAATGTTAATGATGGAATGCAAAATGTTCAAATCAATGTTGTTGATCCAGTGGCAGACATTAGAGAAATACCACAAAACAGTTGTGATGTTTTACATGATTATTTTGATGGAGCTGAGTGTAGCGCTTTTGTTGATTTACTCAATTTTGATATGGATATGTCCAACAGTGAGAAACCAAAAGCCATGTGGTGTAAGATTCGTGCTGTTGTGAAATGGGGAATATCAGTGAGAAGAGTTGCAGCTGCCAGGAGAAATGAACATTTGTTTTATTATGACTATTAG 1515 0.3637 MVSGKQARKDHKGSSNKIPSLGSKRNHGVTKQASNSLKYRIKRMNAHDSLLMKSFIRGVVKYEVERKFQELLISREKIYEGGKSGARALELRFINNNKLPNTTFTKTNIISKDEALQVALFDVRSKSIVNEGPLSSIKIEICPIKGDFESCDDEDWTEAEFSDNILHERENKEPLLVGDRFVTLENGVASISKIMFTDNSGWVRGKKFSLGAKAMKNGENIKEGRSQAFRVKDIRGEAYKKHYPPFLNDDVWRLKLIAENGPFHDRLRSNGIHTVKDLLRLLIVNESSLREKFGQIQKKCWLAIVEHARSCVVDDYKLYSYEIIGQPILLLFNVIYELVGVTFDSREFYSPDDLTLTPNQKNLVEIVKQDAYKNIGNLRAVDEGILNSISLEACIKSTQEQDLQHLEISVANVNDGMQNVQINVVDPVADIREIPQNSCDVLHDYFDGAECSAFVDLLNFDMDMSNSEKPKAMWCKIRAVVKWGISVRRVAAARRNEHLFYYDY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04807 504 PANTHER OS02G0177800 PROTEIN 24 409 IPR012416 GO:0005516
Vivi6g04807 504 MobiDBLite consensus disorder prediction 1 15 - -
Vivi6g04807 504 MobiDBLite consensus disorder prediction 1 36 - -
Vivi6g04807 504 Pfam Calmodulin binding protein central domain 247 311 IPR046830 -
Vivi6g04807 504 Pfam Calmodulin binding protein C-terminal domain 317 379 IPR046829 -
Vivi6g04807 504 Pfam Calmodulin binding protein-like N-terminal domain 89 233 IPR046831 -
Vivi6g04807 504 MobiDBLite consensus disorder prediction 16 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04807 Vivi-Chr6 151779340 151782993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04807 19 383 Calmodulin-binding Proteins AT5G26920 36.605 4.50e-69 225
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04807 - - mtr:25499645 532.717