Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04805 ATGCCTACCGCAACCTTCGACCTAGGAGCCGTTCCCTTCAACCCCGACGGCTGGGGCCCACTCGAATCCACCGCCGACGACTCCAACGTCCCCTTCGCTCCCTTCTCCCGTTCCGACAAGCTCGGCCGAATCGCTGACTGGACCCGCAATTTCAACAATCCGACCCGATCCAAAAACCCCGCCGACTCCGCCTTCGATTTCACCTCCGACGCTTCCTTCCCTTCCTTCGCCGATGATGACTCATCTTTCCGATTAGTCGACGGTAAGCCTCCGCCACGTCCCAAATTCGGTCCCAAATGGCGCTTCCAACGCCAGCTTCAGCTTCCTCAGCGTCGCGACGAGGAGGTCGAAGCTAAGAAGCGTGAAGCGGAGAAAGAACGAGCTCGTCGCGATCGGCATTACCAGAATCGGTCAAACCCTAGCAACCATCGCCGCGAGCTTTTTAAGTCATCGGTTGATATTCAACCGGAATGGAATATGCACGAGCAGATCCCTTTCTCCACTTTCACCAAGCTCTCATTCACTGTCTCTGAGCCGGAAGATCTTCTCCTCTGCGGCGCGGTCGAGAGTTATGATAGGTCTCATGATCGAATTGCTCCGAAAAATGAACGGCGTCTTGAGAGGTTCAAGAATCGTAACTTCTTCAAAGTTACCACCACTGATGACCCTGTTATCCGGAGACTCGCTAATGAGGATAAAGCCACGGTTTTCGCCACTGATGCTATTTTATCGACACTCATGTGTGCTCCTAGGTCTGTTTACTCTTGGGATATTGTTGTTCAGCGAGTTGGGAACAAGCTTTTCTTTGATAAGCGCGATGGGTCGCAGTTGGATTTGCTTTCTGTTCATGAGACCTCGCAGGAGCCATTGCCTGAGGCGAAAGATGATATTAACTCGGCTCATTCGCTTAGTGTTGAGGCTTCTTATATCAATCAGAATTTCTCTCAGCAGGTTTTGATTAGGGATGGGAAGAAGGTTACTTTTGATGAACCTAATCCTTTTGCTAATGAAGGCGAAGAGGTTGCTTCGGTTGGTTATAGGTATAGGAGGTGGAAGCTTGATAATGATATGTATCTTGTTGCTAGGTGTGAGGTGCATAGTGTTGTTGATGTCAACAACCAGAGGTCTTTCCTTACTTTGAATGCTTTGAATGAGTTTGATCCGAAGTATTCTGGTGTTGATTGGAGGCAGAAGTTGGAGACACAAAGAGGTGCTGTTTTGGCTACTGAGCTCAAGAACAATGCTAACAAGTTGGCTAAGTGGACTGCGCAGGCTCTTTTAGCGAGTGCTGATATGATGAAGTTGGGTTATGTTTCTCGGATTCATCCCCGTGATCATTTTAACCATGTGATCTTGGCTGTTGTTGGATATAAACCTAAGGATTTTGCTGCACAAATTAATTTGAATCCAACCAATATGTGGGGGATTGTGAAGTCTATCGTTGACATCTGCATGAAATTGAATGAGGGAAAATATGTTCTTGTGAAGGATCCATCTAAGCCCCAGATTAGGATTTATGAGGTTCCAGCTGATGCATTTGAGAACGACTATGTGGAGGAGCCAATACCTGAGGAGGAGCAAGTCCAACCAAATGCAGATGGTGCTGCTGACGATGCTGATGGTGTAGAGGCAGCTGTGGCTAGTACCAACGATGGAGAAGATAAGAAGGTTGAAGATCAAGCTTAA 1686 0.4792 MPTATFDLGAVPFNPDGWGPLESTADDSNVPFAPFSRSDKLGRIADWTRNFNNPTRSKNPADSAFDFTSDASFPSFADDDSSFRLVDGKPPPRPKFGPKWRFQRQLQLPQRRDEEVEAKKREAEKERARRDRHYQNRSNPSNHRRELFKSSVDIQPEWNMHEQIPFSTFTKLSFTVSEPEDLLLCGAVESYDRSHDRIAPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKATVFATDAILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAKDDINSAHSLSVEASYINQNFSQQVLIRDGKKVTFDEPNPFANEGEEVASVGYRYRRWKLDNDMYLVARCEVHSVVDVNNQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPKDFAAQINLNPTNMWGIVKSIVDICMKLNEGKYVLVKDPSKPQIRIYEVPADAFENDYVEEPIPEEEQVQPNADGAADDADGVEAAVASTNDGEDKKVEDQA 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04805 561 Hamap Eukaryotic translation initiation factor 3 subunit D [EIF3D]. 4 519 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vivi6g04805 561 Coils Coil 111 136 - -
Vivi6g04805 561 MobiDBLite consensus disorder prediction 524 561 - -
Vivi6g04805 561 MobiDBLite consensus disorder prediction 50 147 - -
Vivi6g04805 561 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 4 530 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vivi6g04805 561 MobiDBLite consensus disorder prediction 50 76 - -
Vivi6g04805 561 Pfam Eukaryotic translation initiation factor 3 subunit 7 (eIF-3) 7 507 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vivi6g04805 561 PIRSF Transl_init_eIF3d 1 537 IPR007783 GO:0003743|GO:0005737|GO:0005852
Vivi6g04805 561 MobiDBLite consensus disorder prediction 106 147 - -
Vivi6g04805 561 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04805 Vivi-Chr6 151771740 151775974 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04805 1 559 Eukaryotic Initiation Factors Gene Family AT4G20980 74.662 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04805 K03251 - gmx:100799613 916.376