Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04792 ATGGGTTTTGCTAGTTTTATTCCATGCATTTTTATGCTTATTAATCAACTAGCATATTCTGGGATGAACGTTACGTCCAAGCTTGCAATTGTTGGAGGAATGAACCCACTAGTCCTTGTGGCTTATAGGCAAATTTTTGGAACTGTGGCCATAGCTCCATTTGCTTATTGGCTTGAACGTGATATAGTTCCAAGGATGACAAAGCGTATAATGATACAAATATTTCTATCTTCAGTAACAGGGGTCACAGGAAATCAGGTTCTATATTTTGTGGGACTAAAATATTCAACGGCCACAATTGCTTGTGCTCTAACAAATTTGCTGCCAGCTTTCACATTTGTCCTTGCAGTCCTCTTCAGGCAAGAGAATTTGGGCATAAGGACGAAAAGAGGTATAGCAAAGGTGGTAGGAACAATGTTGTGTGTGGGAGGAGCAATCTTGTTATCATTCTACCATGGTCAAGTGATTGGAATTGGCCAATCAAGTATCCACTGGAGCTATGCCGAGAAGCTTCAAAGTGGTGGTGATAGCTCTGGTTCTTCCGGAAGCTCACTTCTAGGCCCTGTTCTCTTGATTCTTAGTGCTCTCATTTGGTCCTTATGGTTCATAATTCAAGCGGATATGAGCAAGAATTTTCCAGTGCCATATACAAGCACAACCTACATGTGTTTCTTGGCCAGCATCCAGTGTGTGTTCATAGCTTTGTGTTTTGATCATAGTGCTTCGTCTTGGTCACTCCGTAATGCTATGAGAATTGTCTCTTCTGTTTACACGGGAGTAATTTGCACCGCACTGACATACTGTTTGATATCATGGACGATAGAGAGAAAAGGGCCGCTTTATGTGTCCGTATTCACTCCACTACAGCTTATTCTTACCGCGATTATTAGCTGGGCTTTTCTCAGTGAACAGTTATACCTTGGCACTGCACTTGGGTCATTGTTGATTGTTTTCGGGCTTTATGGTGTGCTATGGGGTAAGAGCCAGGAAGCTGATACCAACAAACTGGACGAGGCTAGTGATCAAGATGAAGGTGTTAAGAGAGATGATATGGAGATGCAGTCTTACGTAATGCCATTATCCAATGGTAATGGTCATGGTCATGGTAATGGTAATGGTCACATGTGA 1128 0.422 MGFASFIPCIFMLINQLAYSGMNVTSKLAIVGGMNPLVLVAYRQIFGTVAIAPFAYWLERDIVPRMTKRIMIQIFLSSVTGVTGNQVLYFVGLKYSTATIACALTNLLPAFTFVLAVLFRQENLGIRTKRGIAKVVGTMLCVGGAILLSFYHGQVIGIGQSSIHWSYAEKLQSGGDSSGSSGSSLLGPVLLILSALIWSLWFIIQADMSKNFPVPYTSTTYMCFLASIQCVFIALCFDHSASSWSLRNAMRIVSSVYTGVICTALTYCLISWTIERKGPLYVSVFTPLQLILTAIISWAFLSEQLYLGTALGSLLIVFGLYGVLWGKSQEADTNKLDEASDQDEGVKRDDMEMQSYVMPLSNGNGHGHGNGNGHM 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04792 375 PANTHER WAT1-RELATED PROTEIN 8 337 IPR030184 GO:0016020|GO:0022857
Vivi6g04792 375 Pfam EamA-like transporter family 7 149 IPR000620 GO:0016020
Vivi6g04792 375 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Vivi6g04792 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 150 - -
Vivi6g04792 375 SUPERFAMILY Multidrug resistance efflux transporter EmrE 222 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04792 Vivi-Chr6 151498241 151500968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04792 1 365 Nodulin-like Gene Family AT1G09380 53.533 6.00e-142 406
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04792 - - gmx:100798142 480.715