Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04764 ATGGGCACAGCTACCTGCGTCGATATCATTGTTGCCATCCTCCTTCCACCTCTCGGCGTATTCCTCAAATTTGGCTGCAAAATTGAGTTCTGGCTCTGTTTGGTGCTCACACTTTTTGGTTATCTTCCTGGAATTCTATATGCCATCTATGCTATCACTAAGGATCAATCATGA 174 0.4425 MGTATCVDIIVAILLPPLGVFLKFGCKIEFWLCLVLTLFGYLPGILYAIYAITKDQS 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04764 57 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016020
Vivi6g04764 57 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016020
Vivi6g04764 57 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 55 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04764 Vivi-Chr6 150906575 150907761 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04764 1 54 RCI2 Gene Family AT3G05890 81.481 1.01e-27 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04764 - - aof:109836707 110.153