Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04762 ATGGGTACAGCTACCTTCGTCGACATCCTTCTTGCCATCGTTCTCCCACCTCTTGGTGTCTTCTCAAGGTTTGGCTTAGAAGAGGAGTTCTGGATCTGTTTGATTCTGACTCTTTTTGGCTATCTTCCTGGAATCATCTATGCTATTTACATTATCACTAAGTGA 165 0.4303 MGTATFVDILLAIVLPPLGVFSRFGLEEEFWICLILTLFGYLPGIIYAIYIITK 54
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04762 54 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 3 54 IPR000612 GO:0016020
Vivi6g04762 54 ProSitePatterns Uncharacterized protein family UPF0057 signature. 10 25 IPR000612 GO:0016020
Vivi6g04762 54 Pfam Proteolipid membrane potential modulator 6 52 IPR000612 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04762 Vivi-Chr6 150871662 150877407 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04762 1 54 RCI2 Gene Family AT3G05890 79.630 2.66e-26 88.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04762 - - pvy:116137779 98.9821