Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04744 ATGGTGAAGAAGAATAATAAGAGCAATGGAAGTGGCAAGATGGTAGACGCAAAGGCTATGGCGCCGGTTAGTATGGGCAAAGCCAAAACTATTGCAATTCTCGGTGCTGACAAAGAAAAGTCAGCTGCTATGGTAGGTGCTCAGAAAGTGAAGAGTGGAACCTCTGCTGGATTCAAATGGATCAAGAATCTGTGTAAGAAAAAGAATTGTTTTAGTGCTTATATCATCCACTCCTTCATAACCTATACTAAGAATTTACGCTCACAGGCCTTGTGTCAAGGTTATCCAACAGAAATTGCTTCATACTTCCATCACTGCCGCTCATTAAGGATTGATGATAAGCCAGATGATATTGGAGGACGTGATATCCAAAAACAGGAAATTTGCGAGGCTGTAAAGTTACCTCTCACACATCACAATTTATACAAGCAAATTGGTATTGATACTCCTCGAGGTGTTTTACTATGCGGCCCCCTTGGAACTAGTAAAATAATGCTTGCCAAAGCTGATGCTAATCATACCACTGCCGCCTTTATCAGGGTTATGGGCTCTGAGTTTGTGCAGAAGTATCTTGGTGAGATATTGCAGCTGCAATTTAACTACATAAAGGAGTATCAAATGTTAGGGGGAAAGTACATTAAGTTGCTTCAGAATGTTGATACTGCACAAACTTGTGAGATAGCATAA 687 0.4061 MVKKNNKSNGSGKMVDAKAMAPVSMGKAKTIAILGADKEKSAAMVGAQKVKSGTSAGFKWIKNLCKKKNCFSAYIIHSFITYTKNLRSQALCQGYPTEIASYFHHCRSLRIDDKPDDIGGRDIQKQEICEAVKLPLTHHNLYKQIGIDTPRGVLLCGPLGTSKIMLAKADANHTTAAFIRVMGSEFVQKYLGEILQLQFNYIKEYQMLGGKYIKLLQNVDTAQTCEIA 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04744 228 PANTHER 26S PROTEASOME REGULATORY SUBUNIT 88 193 - -
Vivi6g04744 228 Pfam ATPase family associated with various cellular activities (AAA) 153 207 IPR003959 GO:0005524|GO:0016887
Vivi6g04744 228 Gene3D - 109 225 IPR027417 -
Vivi6g04744 228 FunFam Cell division control protein 48 homolog E 114 187 - -
Vivi6g04744 228 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 114 210 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04744 Vivi-Chr6 150587225 150588915 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04744 116 193 Calmodulin-binding Proteins AT3G56690 38.462 1.20e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04744 K03063 - ddi:DDB_G0289003 133.65