Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04721 ATGATAATGAAGCTGATTCTCATAATAACGTTTTCATTTGTTATCTCAGTGATTAGATCTGAGACTGAGACAGAGAGTTTTTCACCTCTGTATATGTTGGAAAACGATGTCTTTTCAACTCAAGTGTCTTCTTCTCAACCTCAATCTCTCATGGTTCCACTCACTCTTATTCAAGGAGCTGATTCTAAGGGAGCAGTATGTTTGGATGGAACATTACCTGGTTACCACTTGCATCGTGGATCTGGATCTGGTGCAAATAATTGGCTAGTTAATTTAGAGGGAGGAGGATGGTGTAACAATATCAGAACTTGTGTCTTTAGAAAAACTACTCGTCGCGGTTCGTCAAAGTACATGGATAAGCAAATACCATTCACAGGGATATTGAGCAATAAAGCTGAAGAAAATCCTGATTTCTTTAACTGGAATAGAGTCAAAGTGCGGTACTGCGATGGCGCATCTTTCGCTGGAGACAGTCAAAATGAGGCTGCAAACCTTCAATTTAGAGGACAAAAGATATGGCTAGCTGCAATGGAGGAATTAATGTCCAAAGGAATGAAGAATGCCAAACAGGCTCTTTTGTCTGGATGCTCTGCGGGCGGTCTGGCAACTATACTACATTGTGACGATTTCGGAAGCTTGTTTCCAAAATCTACCAAAGTCAAATGTTTCAGTGATGCAGGATTCTTTCTTGACGCAATCGATGTATCTGGCGAACGCACATTGAGGAAAATGTTCGGAGGCGTTGTTAGTTTACAGGAAGTACAAAAAAATCTGCCAAAAAGTTGTCTTGACCACCTCGATCCAACTTCGTGCTTCTTTCCTGAAAACTTGATCGATCATATTCAAACTCCGTTGTTTCTGCTGAACGCGGCTTATGATGGATGGCAGTTGTATGAAAGTTTAACCCCGTCTACGGCCGATCCCCATGGCTATTGGAATGCTTGTAAATTGAATCAGACGAATTGTAACTCGACCCAAATTGAGTTCCTCCAAAAGTTCAGGAATCAAATGCTAAATGACGTAAAAGACTTCTCAACGACATCTCAATCTGGATTATTCATAAATTCTTGTTTCACGCATTGTCAATCCGAGAGACAAGATACATGGTTTGCTAGTGACTCTCCACTTCTTAACAACACGCGGATTGCGAACGCGGTTGGAAATTGGTTTTTCGATCGGAAAGTTGTGAAAGCCATTGACTGTCCTTATCCTTGTGACAAAACCTGCCATAGTTTGTTCACCAAGAAATCATTGTGA 1257 0.4105 MIMKLILIITFSFVISVIRSETETESFSPLYMLENDVFSTQVSSSQPQSLMVPLTLIQGADSKGAVCLDGTLPGYHLHRGSGSGANNWLVNLEGGGWCNNIRTCVFRKTTRRGSSKYMDKQIPFTGILSNKAEENPDFFNWNRVKVRYCDGASFAGDSQNEAANLQFRGQKIWLAAMEELMSKGMKNAKQALLSGCSAGGLATILHCDDFGSLFPKSTKVKCFSDAGFFLDAIDVSGERTLRKMFGGVVSLQEVQKNLPKSCLDHLDPTSCFFPENLIDHIQTPLFLLNAAYDGWQLYESLTPSTADPHGYWNACKLNQTNCNSTQIEFLQKFRNQMLNDVKDFSTTSQSGLFINSCFTHCQSERQDTWFASDSPLLNNTRIANAVGNWFFDRKVVKAIDCPYPCDKTCHSLFTKKSL 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04721 418 PANTHER NOTUM-RELATED 37 411 IPR004963 GO:0016787
Vivi6g04721 418 Pfam Pectinacetylesterase 45 395 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04721 Vivi-Chr6 150245270 150248300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04721 3 416 Carbohydrate Esterase AT1G57590 63.830 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04721 K19882 - gmx:100785270 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04721 6 150245270 150248300 Vivi1g05428 1 118919626 118922405 PCT