Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04714 ATGGAAAACCACCACCACAACCACCGTGAATTCTCCTTCTTAACCTCCTCCGGCGACTTCCTCTGTAACAACACAGATCCTTCAATCAAGGAAATGAATCTCTTCTCATCATCACCTAACGACAACCAAGATCAAGAACAAGATCAAGATCAACATGTTAATACAGGACTGAATTTAACGTATGCAAGTGCTACAAAGTCCAAAGTAGAAAATCCTGAGAATTCCGAAACTGAGCTGATGAATACACTGCAAATTGAATTGAGGAAGGTGCAAGAAGAGAATCAGAAACTAAGAAATGTGTTGGAACAAATCACCAAAAGCTATAGCCAATTACAAGCTCAGTTGTTCATCGCTTTGCAGCAACAAAACCATGTCGATAATATGGAAACAAATCATGTGATGGAATCATCGGAACAAAAGATTATGAATGATGCATCCGTTTCGGATGGAAAACAAGCTTGTCCTTCGGATCATAGTGCGAAAGATGTTGTTGAATGTTCTTCTTCACACTCATCCAAAACTTCTGAACAAGATCTAACGCATTTCAGAAAAGCTAGGGTTTCGATAAGAGCAAGATCAGAAGCTCCTATGATTAGTGATGGATGTCAATGGAGAAAATATGGACAAAAAATGGCGAAAGGAAACCCTTGTCCTCGCGCGTACTATCGTTGCACTATGGCGGTAGGATGTCCCGTTCGAAAACAGGTCCAAAGATGTGCGGAAGACAAGATCGTTTTGATAACAACATACGAAGGCAATCACAACCATCCACTCCCACCGGCCGCAGCCGCAATAGCAAACACCACATCAGCAGCTGCATCAATGCTACTATCAAGTTCTTCAACCTCATCAACACTAAGCAAAGAATCAGCACCATTTTTATCTTCATTCCCTTACGCTACAATATCAACCCTATCATCTTCTCAACCATTTCCAACCATCACTCTCGACTTGACACACGGCCACAACCTTGCCATGCAACACAACAGAATTCCTCTACCATTACAGCATCCACAACAACAACTACTAGGTGTTAACCCGTTCTTGTTCTCACAGAAGCTACCAACTATGGCCTTGCCCTTACTTCAGCTAGGGCAAAGACCACCTTCATCAATGGTGGAGAGTGTGAGTGCAGCCATATCTTCGGATCCAAACTTCACTGCAGCCTTGGCGGCAGCGATTTCGTCAATTATTGGAGCACAAAGAGGGGGTGATGATAATAATAACAATGCAAGTGTGGTTCCTGCAGGTTCACCTCAGCTTCCTCAGTCATGCACTACATTCTCTACCAATTAG 1296 0.429 MENHHHNHREFSFLTSSGDFLCNNTDPSIKEMNLFSSSPNDNQDQEQDQDQHVNTGLNLTYASATKSKVENPENSETELMNTLQIELRKVQEENQKLRNVLEQITKSYSQLQAQLFIALQQQNHVDNMETNHVMESSEQKIMNDASVSDGKQACPSDHSAKDVVECSSSHSSKTSEQDLTHFRKARVSIRARSEAPMISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKIVLITTYEGNHNHPLPPAAAAIANTTSAAASMLLSSSSTSSTLSKESAPFLSSFPYATISTLSSSQPFPTITLDLTHGHNLAMQHNRIPLPLQHPQQQLLGVNPFLFSQKLPTMALPLLQLGQRPPSSMVESVSAAISSDPNFTAALAAAISSIIGAQRGGDDNNNNASVVPAGSPQLPQSCTTFSTN 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04714 431 MobiDBLite consensus disorder prediction 408 431 - -
Vivi6g04714 431 SMART WRKY_cls 198 258 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g04714 431 MobiDBLite consensus disorder prediction 31 50 - -
Vivi6g04714 431 Pfam WRKY DNA -binding domain 200 257 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g04714 431 Coils Coil 73 114 - -
Vivi6g04714 431 ProSiteProfiles WRKY domain profile. 193 259 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi6g04714 431 Gene3D WRKY domain 183 260 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi6g04714 431 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 65 410 IPR044810 GO:0003700
Vivi6g04714 431 FunFam probable WRKY transcription factor 31 183 260 - -
Vivi6g04714 431 SUPERFAMILY WRKY DNA-binding domain 191 259 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04714 Vivi-Chr6 149940648 149943542 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04714 1 431 WRKY Transcription Factor Family AT4G01720 41.400 1.83e-90 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi6g04714 WRKY 5.3e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04714 - - psat:127132551 677.552