Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04706 ATGGCAATGTCTGTGATTAGAACAAAACGAGACCTAGTTAAACCTGCCAAGGAGACACCATTGGTCACACTAGACTTGTCGGTAATAGACAAATTACCTGTTCTAAGATGCAACGTTAGAACCTTGCATGTGTTTAGATATGGCCCTGAAGCAACAAGGGCCATAAGAGAGGCATTGTCCCTAGCACTTGTTCCTTACTACCCTCTTGCAGGACGGCTCAAAGAGTCTAATCCGCGGTGCCTCCAGATCGAATGTTCGGGTGATGGTGTGTGGTATGTTGAGGCATCAACAGATTGCACACTTGACTCCATCAATTACTTTAATGAAATAGAGTCTATTCCCTATGGTAATCTTCTTCCTGATGACATTCCGAAGATCGGACACATTGATCCCCTTGTGCAAATGCAGGTGACACAATTTGGGTGTGGGGGTTTTGTGATAGGCCTGGTATTCAGCCATAGCATATGTGATGGCCTTGGTGCTGCACAATTTCTAAATGCGGTTGGGGAGATAGCTAGAGGACTTGAAAAACCCACCATTGAACCAGTGTGGTACAGGAACTTCTCACCCTCTCCTCAACCAAATGCATTGCCAAAACTACCTCTAACAGGTCCACCTAAAATGCCACACTACAAGCTAAAGCATTCTAACATAGACTTTACTATGGATCAAATCAACAGGCTGAAAAGACAGTTTCAACAAGTAACTAGTCGAGGTTGTTCTACCTTCGAAATTGTTGCTGCGTTGTTTTGGAGCAGCAGAACAAGAGCCATTAATTTTGGTCCCAATACCCAAGTGAAGCTTGTGTTCTTTGCAAATTGTCGACACCTAATAGACCCTCCTCTACCCAATGGTTTCTACGGGAACTGTTTCTTCCCAGTGACAACTACAACTTCATGCGAGTCACTTGGAAAAGCAGTGAATATCATTGAAGTGATAAAGCTGATTCAAGAAGCGAAGTCCAGGTTACCTCTAGAGTTTGTTAAGTACTTGAAGGGTGACCATATAAAAGGTGGCAATAAAGATGAGGAGGACCCTTTTGCACCTAAACCAAATTACGCCACACTCTTTATGTCGGAATGGGGGAGGTTGGGATTCGACAATGTGGACTATCAGTGGGGTCCACCTGTCCAAGTGGTCCCCATTCAAGGCTCTGTCATTGTACCAGCTGGCATTATGCGCTCGCTGCCACTCCCAAATAGAGGGATTCGTTTGGTTACATGGTGTGTGGAGGAGGCGCATCTCCTTCCCTTCATTGATCAAATTCATGGTCTTATAAATCAGCAACTGTTTTAA 1296 0.4452 MAMSVIRTKRDLVKPAKETPLVTLDLSVIDKLPVLRCNVRTLHVFRYGPEATRAIREALSLALVPYYPLAGRLKESNPRCLQIECSGDGVWYVEASTDCTLDSINYFNEIESIPYGNLLPDDIPKIGHIDPLVQMQVTQFGCGGFVIGLVFSHSICDGLGAAQFLNAVGEIARGLEKPTIEPVWYRNFSPSPQPNALPKLPLTGPPKMPHYKLKHSNIDFTMDQINRLKRQFQQVTSRGCSTFEIVAALFWSSRTRAINFGPNTQVKLVFFANCRHLIDPPLPNGFYGNCFFPVTTTTSCESLGKAVNIIEVIKLIQEAKSRLPLEFVKYLKGDHIKGGNKDEEDPFAPKPNYATLFMSEWGRLGFDNVDYQWGPPVQVVPIQGSVIVPAGIMRSLPLPNRGIRLVTWCVEEAHLLPFIDQIHGLINQQLF 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04706 431 Gene3D - 1 199 IPR023213 -
Vivi6g04706 431 PANTHER ACYL TRANSFERASE 4 3 423 - -
Vivi6g04706 431 Pfam Transferase family 4 383 - -
Vivi6g04706 431 Coils Coil 218 238 - -
Vivi6g04706 431 Gene3D - 201 419 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04706 Vivi-Chr6 149872977 149874928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04706 12 418 Monolignol Biosynthesis Gene Families AT5G48930 28.474 4.49e-34 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04706 - - mtr:11426631 721.465