Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04699 ATGGAAAATGCATTCTCTTCGGCCAAGATTTCCGTCTGGTGGGACGTTGAAAACTGCCAAGTTCCTCCAAACTTTAACCCTAACTCCATCGCTCAGAACATTGCCTCCGCTCTCGTCAACTCCAACTTCCACGGCCCTACCACCATCTCCTCTTACGGCGACACCACTCGCATCCCTCTTCACATTCAACACGCCCTCTCTTCCACCGGCATCTCCCTCAACCACGTGCCCGCCGCTAAAGATGCTAAGGAGAAGAAGATACTAGTTGACATGTTGCTATGTGCGATTGATAATCCTGCACCGGCAAACTATTTGTTGATTTCCGGTGACGGAGACTTTTCGAATGCTCTTCATCAACTTCGAATGAGGAGGTATAATATTCTTCTTGCTCATCCTTGTTCCAATTCTTTATCGCTGTTTTCCGCGGCCGATATCGTTTGGCGGTGGCCGGTACTCATTGCTGGTGGTCCTCCTGATGTCCATGAACACAGTAACATTGTTAGAAATGCTTATCAGCCTAAACTCTCAATTGCACCTCTTGAGGCAAATAGTGAAAAAAATAACAAGAATAGTAACCTGAATGACCGTTTTGTCCCTGAAAATTCAAAGAAATCTAAATTGGTTAGATTAGCCCCACATGAATTCTTTTCTAATAATGACCCCACAAAAGTGTCAAAAGTACTCAACAATACTGATCCTGGTAGTGATTCTGATGCTGTTGGTGGTTCTGATCAGTTGTTGATTAGTAATGTACCTGCAGTTAAGAGTTTGCCAAAAGTTTTACCTTGTGAGGATTTGCAAGGACTTGTTGATGTTATTGTAATAACATTGAAAACTCTCAAAGATGAAATGGTTTTTCCGAGTGAAAGAAATATTACTGATTGTATTCGTTATGGCGATCCCAAGTATCAAATGATCGACGTTAGGAAGGCTTTGAATTGTGCAAATGAGCAACAGAGAGTGGTTAAACGACGCTTTGGCGCGTTGCATTTATATGTTTTAGCAAATGAGAGTCTCTGGAAGTGTGTGAACCCTTTAGGTGGATTGCCAAGTCATTTTCCGGAAGAAATTTGGGTTCGAATTGAGAAATTCCTTGCTTCGTCGTCAGGATGTTCCGCAATTTTGGCATCTCGTTGCAGATACGAAGCTGCTTTGATTCTAAAGAGATTGTGCCTTGGAGAGCTTGTTTTGGGTGATGTTTTAAAGATTTTGGAGATTTTAATCACCATCAAGAATTGGATTATACCTTGTCATTCTAGTTGGCACCCGATTACCATTTCGCCTATGGAGGCAAAAGATGATAATTGA 1308 0.4213 MENAFSSAKISVWWDVENCQVPPNFNPNSIAQNIASALVNSNFHGPTTISSYGDTTRIPLHIQHALSSTGISLNHVPAAKDAKEKKILVDMLLCAIDNPAPANYLLISGDGDFSNALHQLRMRRYNILLAHPCSNSLSLFSAADIVWRWPVLIAGGPPDVHEHSNIVRNAYQPKLSIAPLEANSEKNNKNSNLNDRFVPENSKKSKLVRLAPHEFFSNNDPTKVSKVLNNTDPGSDSDAVGGSDQLLISNVPAVKSLPKVLPCEDLQGLVDVIVITLKTLKDEMVFPSERNITDCIRYGDPKYQMIDVRKALNCANEQQRVVKRRFGALHLYVLANESLWKCVNPLGGLPSHFPEEIWVRIEKFLASSSGCSAILASRCRYEAALILKRLCLGELVLGDVLKILEILITIKNWIIPCHSSWHPITISPMEAKDDN 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04699 435 CDD PIN_limkain_b1_N_like 9 132 - -
Vivi6g04699 435 PANTHER LIMKAIN B LKAP 7 316 IPR024768 GO:0005777|GO:0010468
Vivi6g04699 435 Pfam NYN domain 9 144 IPR021139 GO:0004540
Vivi6g04699 435 Gene3D - 4 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04699 Vivi-Chr6 149794735 149796684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04699 2 158 C2H2 Transcription Factor Family AT5G61190 65.190 3.71e-61 212
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04699 6 149794735 149796684 Vivi6g04699 6 149794735 149796684 ECH