Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04690 ATGGATGACTGTTGTGCTGTTTGCGCTGAGCCATTGGAATGGGTTGCGTACGGACCTTGTTTGCACCGCGAGGTTTGTTCTACGTGTGTCGCGAGACTCCGGTTCATTTGCGATGATCGACGGTGCTGCATCTGTAAGACCGATTGCAATATCATCTTTGTTACCAAGGCTCTAGGAGATTATACAAGGGTGATTAATGACTTTGCATCCCTTCCCTCTGAGGTAAGGGAAGGAAAGGTTGGATCGTATTGGTACCATGAGGATATGAATGCATTTTTTGACGATGTGGACCATTACAAGATGATCAAGGCTATGTGTAGGCTTTCTTGCAGTGAATGTGACAAATCGGAGGAGCAACAGAATGATGGGTCAAGGCGACAAGCAAGGTTTAGGAATATAGGACAGCTGAAGGGTCACTTGTTTCACCGTCATAAGTTGCATATGTGCAGTTTGTGTTTGGAGGGAAGAAAGGTATTTATATGTGAGCAAAAACTCTATACTAGAGCCCAGTTAAATCAACACATAAACACAGGTGATTCCGAGGTGGATGGAAGTGAGAGTGAGAGAGGTGGTTTTATGGGGCATCCTATGTGTGAATTTTGCAAAACCCCATTTTATGGGGACAATGAACTGTACACACACATGTCTACGGAACATTATACTTGTCATATATGCCAAAGGCAGCATCCAGGACAGTATGAATACTATAAGAATTATGATGATCTTGAGATCCACTTCCGACAACAGCATTTCTTATGTGAAGATGATGCTTGCCTTGCCAAGAAATTTATTGTGTTTCAATCTGAATCAGAGATGAAGAGACATAATACTATGGAACATGGAGGACGAATGTCACGGTCAAAGCGTAATGCTGCTCTTCAGATACCAACTAGTTTTCGATATAAACACAATAATGAACAGGATCAACGTCGTGGAAGAGGGCGAATGTTTCGTCGTGATCATTCTGAAAATCAACTTTCCATGGCTATTGAAGCCAGTTTGGAGACTGCTAATGCTGAGCAAACATATCGCGAGCCAACTTCAAGTAGTGGACAAATTGGTTATGATGATGGGGATGCAGATATTGATTCCATCATTAATCCATTTGAATCATTAGCTACTGCAGGTTCTGAATCAACTTCAAGATACATTCAAGCCTTAGGACATGGCTCTAAACCTCTGGTAGACTCCTCCTTTCCTCCACTTCCCATAACTTCCAGCAATGGCCAGCAAAGGTCCAAACATGAGTTTGAAGGTTCATCAAGCAATACTATGGCAGCACGTTTGCGTCGGCATGGCAACAGAAATATATCTGTTATTAACTCTGGAAATGCCTGGTCTGTAGCAGGTCGTGGACCTGTACAAACATCAAGTAGTCATTCACATTCTAAGAAGTCAACAAATCATGCTCTTGGAGGGTCTCATAACTCTAGCCAAACAAAGAAAGTAGTTAGCAGTGGACCTTCACCATCAAGTTATGCTAATCCTCCTGGAGGATCTCATAACTCTAGCCAGACAAAGACAGTAGTTAGCAGTGGACCTCCACCATCAAGTTATGCTAATCCTATTCCATCTGCACATAGAACTGCTCATGGACAATTACCTGCTGGTCCATCCAGGGACACACGTGAAAATGGCAGAATCGTTCACTCTGCATCAGCTCCAAACCTCGTTGAGAACAACCCTGTTGGAGTTCCAATTTCTGATTTTCCTCCCGTTTCTGCTGCTGTACAAGTGAGCAAGTTACAACCTACGAGCAGCCAGCCTCCGTTGAATGTGGAGAATGTTCAGTCTGCCAACAAGTCCTTGGTTGAAAAGATTCGCAGTACGCTTGATTTTGATGAAGATAGATACACTATATTTAAAGACATATCTGCTCAATATCGCCAAGGAACAATAGATACTGATACATATGTGGACTATGTGCAGCAGTTTGGCTTGTTTCATCTTGTACCTGAGTTGGCAAGACTATGCCCGGATGCTCGGAAGCAGAGAGAACTTGTGGAGTCTTACAATGCTGGTTTCAAAAGAAATGCTTTTCAAGAAAGTGACAGGGTTTATGGCAGTGCTAGCACCCATCACAAGAACGGTAATGTTGACAAGAAAGGTAAAGGCAAGTCATTAGAGGTTAAGCGGAATCACTCCACTGAGAAATTAGCAGATAGCTTTTTAAGCACTGTACATCAACTACAATCAAATTATAAACCTTCAGAAGAGAAGTTGGAGGTGCTATCAAAGGGTGCTTATCGCACTGACAAGGGTAAATTCAAAACCGAGCTGCAGACTGATACAAACACTAGCAATCAAAATAAGATTAAACTTGGTGGGAAGACTGAAACGTCAAACGGCAATTTATCCAATCAAAATAAAGAGGATGGGGGTGGTGGGAACAAGCAACGCAAGAAAGCTTCCAAGTTCCTCAGAGTTCGCCTTGGTGATGGTTCTGCTTCGGCCCTTCTAGATCTTGATAACTCACGGAGTACATCTGATCCTAGAGAAACAGACGGTTTAGATGGTAACAATAATGATTCTGGAGTTGGGCTGCCTGTGCGAGGTGTTTGGCGAAAAGGGGGAGGTCAAAAACTCTTCCCCTGA 2595 0.4304 MDDCCAVCAEPLEWVAYGPCLHREVCSTCVARLRFICDDRRCCICKTDCNIIFVTKALGDYTRVINDFASLPSEVREGKVGSYWYHEDMNAFFDDVDHYKMIKAMCRLSCSECDKSEEQQNDGSRRQARFRNIGQLKGHLFHRHKLHMCSLCLEGRKVFICEQKLYTRAQLNQHINTGDSEVDGSESERGGFMGHPMCEFCKTPFYGDNELYTHMSTEHYTCHICQRQHPGQYEYYKNYDDLEIHFRQQHFLCEDDACLAKKFIVFQSESEMKRHNTMEHGGRMSRSKRNAALQIPTSFRYKHNNEQDQRRGRGRMFRRDHSENQLSMAIEASLETANAEQTYREPTSSSGQIGYDDGDADIDSIINPFESLATAGSESTSRYIQALGHGSKPLVDSSFPPLPITSSNGQQRSKHEFEGSSSNTMAARLRRHGNRNISVINSGNAWSVAGRGPVQTSSSHSHSKKSTNHALGGSHNSSQTKKVVSSGPSPSSYANPPGGSHNSSQTKTVVSSGPPPSSYANPIPSAHRTAHGQLPAGPSRDTRENGRIVHSASAPNLVENNPVGVPISDFPPVSAAVQVSKLQPTSSQPPLNVENVQSANKSLVEKIRSTLDFDEDRYTIFKDISAQYRQGTIDTDTYVDYVQQFGLFHLVPELARLCPDARKQRELVESYNAGFKRNAFQESDRVYGSASTHHKNGNVDKKGKGKSLEVKRNHSTEKLADSFLSTVHQLQSNYKPSEEKLEVLSKGAYRTDKGKFKTELQTDTNTSNQNKIKLGGKTETSNGNLSNQNKEDGGGGNKQRKKASKFLRVRLGDGSASALLDLDNSRSTSDPRETDGLDGNNNDSGVGLPVRGVWRKGGGQKLFP 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04690 864 MobiDBLite consensus disorder prediction 400 422 - -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 695 710 - -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 760 793 - -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 445 544 - -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 686 710 - -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 394 422 - -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 445 516 - -
Vivi6g04690 864 SMART c2h2final6 220 250 IPR013087 -
Vivi6g04690 864 SMART c2h2final6 108 144 IPR013087 -
Vivi6g04690 864 SMART c2h2final6 196 219 IPR013087 -
Vivi6g04690 864 SMART c2h2final6 251 280 IPR013087 -
Vivi6g04690 864 PANTHER ZINC FINGER PROTEIN 598 1 771 IPR044288 GO:0061630|GO:0072344
Vivi6g04690 864 MobiDBLite consensus disorder prediction 818 864 - -
Vivi6g04690 864 CDD RING-HC_ZNF598 3 54 IPR041888 -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 755 801 - -
Vivi6g04690 864 ProSiteProfiles Zinc finger RING-type profile. 5 46 IPR001841 -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 338 354 - -
Vivi6g04690 864 MobiDBLite consensus disorder prediction 338 359 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04690 1 859 C2H2 Transcription Factor Family AT3G62240 51.814 0.0 837
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04690 6 149620446 149625455 Vivi6g04690 6 149620446 149625455 ECH