Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04662 ATGTCCGCCGCCGCCCCTTTCTCTCCCGTATCTACGACTACTACCAACGTAAAAACCATTTTCGTACGCCTGCTCATTCAACATCTGGCAATATATGATACCTCAGAGATGAAACGCATTCGGCTGGTGTCTGCCATGGAAATTACTTTAGCTTGTGGAAATTACTTTAGTCCCCCTATTAAAAAAATGCATGTTTACTTTTGCTGGTGTTTGAGATACTTGGAAGATGTTTTTGCCCTTAGACAGGGCATTCCTTTTCGGCGCATCTGCCGTGGTGTTGGGAGGACAACCCAAGCTCAGTCATTCCAATGGGCAAGGATGCTGGTCTACGAAGTTTGCTAA 342 0.4561 MSAAAPFSPVSTTTTNVKTIFVRLLIQHLAIYDTSEMKRIRLVSAMEITLACGNYFSPPIKKMHVYFCWCLRYLEDVFALRQGIPFRRICRGVGRTTQAQSFQWARMLVYEVC 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04662 113 Gene3D Ribosomal protein L22/L17 57 111 IPR036394 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04662 Vivi-Chr6 149278551 149280710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04662 72 101 Cytoplasmic Ribosomal Protein Gene Family AT1G67430 70.000 1.91e-09 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04662 K02880 - vvo:131610451 150.214