Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04651 ATGTTAATCGATATATTAAAAAAGGTCCAGGGCTCATTGCTGTTATGGATGCATATATTATCTTACATGGTATTTATGATCAAGTTTGGTGCATGTGGCGAAACACTGGAACCTCCATTGCTATCCGCAGCCAGGTCATCTTTGAAACACTGGAACTCCCACGGGTCTAAGTATGTGCTTTCTCATGGTGCAGCAACAACTGGAGCACTGTCCCCGGCCAACCCTCCTTCTTATGGCCCTTTCATAAACCCTAGTCACGCCCCTAAAAGTTCACATTTTTCCATCCAATTTAAGAAGAGGAGTGAATGGAAACCTCCAATTTCTGGATTTAAAGATATTGCTCCTATTCATTCTACAGAAGCTGCAGTGCCTTCTGTTTTGGCTCAGCCACCGTTGACCCCTCATGTTTCCAATTGTTGTAAACAAGACATGGTGTTGAAACGAGGCGGTAAGGGTTGCCACTGTGTATATCCCATAAAGCTAGACATTCTTCTTTTGAATGTCTCTCAGAATCCTGATTGGGATAAATTTCTTGAAGAATTAGCTACCCAGCTAGGGTTACAAAATAATACCCAGATTGACCTGATAAACTTTTATGTGATCAACTTTTCAACATTAAATATCTCAATGGATATTACTCCACATAAAGGTATCAGTTTCTCTGCCAATGAAGCTTCTAAAATAAACTCTTCACTGTCAATGCATAAGGTGCGCCTAGACCCTGGATTAGTAGGTGGGTACAAACTTCTCAACATAATCTGGTTTGAACCTCCACCTCCGGCTCAAGCACCTACTTTAACTGCTTCGCCAGAGAAAGCACCTTTGTATCATTCACCTACGACTACATCATTGAGTTCTTCAAATAAGGGAGGGCATTCAAATCTATTTCTTATTCTTGGAATTGCTATTGGCATGCTCTTCATTGCAATTGTATCTATATTAATATTCTGTTTGTGCACGTTGCTGTCAAAGGAAAAAACACCCCCCACTGAAACTGAAAAGCCAAGGACAGAGAATGCTGTTTCAGCTGGGGGCTCTATTCCCCACCCAACCAGTACACGATTTATTGCTTTTGAAGAACTTAAAGAAGCCACAAACAATTTTGAACCTGCAAGTGTACTTGGAGAAGGAGGGTTTGGTAAGGTTTTCAAAGGTACCTTAAGTGATGGTACTTCTGTTGCAATTAAGAGGCTTACAAATGGAGGGCAACAGGGTGACAAAGAGTTTTTGGCTGAGGTTGAAATGCTTAGTCGGTTGCATCATCGTAACCTTGTAAAATTAGTGGGATACTATAGTAATCGTGAGTCGTCACAAAATCTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCTTGGCTTCATGGTCCCATGGGAATAAATTGTCCTTTAGATTGGGACACCAGAATGAAGATTGCACTCGATGCTGCAAGAGGACTTTCGTACCTACATGAAGACTCACAGCCATGTGTAATACACAGAGATTTCAAAGCATCCAACATATTGCTCGAAAATAATTTTCACGCTAAGGTTGCAGATTTTGGTCTTGCTAAGCAGGCGCCTGAAGGCGGAGCTAATTATTTGTCTACTCGTGTCATGGGCACATTTGGGTACGTAGCTCCTGAGTATGCCATGACCGGACACCTACTTGTTAAAAGTGATGTGTATAGCTATGGAGTTGTCTTGCTAGAACTGCTCACCGGAAGGAAACCCGTGGATATGTCACAGCCATCCGGACAAGAGAACCTTGTTACCTGGGCCAGACCGATCCTTAGAGATAAGGACCGATTGGATGAGATTGCTGATCCAAAGCTCGGGGGAAAGTATCCAAACGAAGATTTTGTACGCGTGTGCACTATTGCAGCAGCGTGTGTTGCTCCTGAAGCAAACCAACGACCGACAATGGGTGAAGTGGTACAGTCACTTAAAATGGTGCAGCGAATCACAGAATACCATGATTCAGTGCTAGCCTCATCCAATACACAGACCAATCTGAGACAGTCATCTAGCACTTTTGAGTTTGACGGAGCATCGTCCGTGTTTTCTTCAGGCCCTTACTCTGGTCTAAGTGCCGCCTTTGACAATGACAACATTTCTAGGACAGTGGTTTTCTCCGAGGATCTTCATGAAGGACGATGA 2142 0.4304 MLIDILKKVQGSLLLWMHILSYMVFMIKFGACGETLEPPLLSAARSSLKHWNSHGSKYVLSHGAATTGALSPANPPSYGPFINPSHAPKSSHFSIQFKKRSEWKPPISGFKDIAPIHSTEAAVPSVLAQPPLTPHVSNCCKQDMVLKRGGKGCHCVYPIKLDILLLNVSQNPDWDKFLEELATQLGLQNNTQIDLINFYVINFSTLNISMDITPHKGISFSANEASKINSSLSMHKVRLDPGLVGGYKLLNIIWFEPPPPAQAPTLTASPEKAPLYHSPTTTSLSSSNKGGHSNLFLILGIAIGMLFIAIVSILIFCLCTLLSKEKTPPTETEKPRTENAVSAGGSIPHPTSTRFIAFEELKEATNNFEPASVLGEGGFGKVFKGTLSDGTSVAIKRLTNGGQQGDKEFLAEVEMLSRLHHRNLVKLVGYYSNRESSQNLLCYELVPNGSLEAWLHGPMGINCPLDWDTRMKIALDAARGLSYLHEDSQPCVIHRDFKASNILLENNFHAKVADFGLAKQAPEGGANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPSGQENLVTWARPILRDKDRLDEIADPKLGGKYPNEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYHDSVLASSNTQTNLRQSSSTFEFDGASSVFSSGPYSGLSAAFDNDNISRTVVFSEDLHEGR 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04651 713 PANTHER OS01G0750732 PROTEIN 138 667 - -
Vivi6g04651 713 Pfam Protein tyrosine and serine/threonine kinase 372 643 IPR001245 GO:0004672|GO:0006468
Vivi6g04651 713 Gene3D Phosphorylase Kinase; domain 1 332 445 - -
Vivi6g04651 713 CDD STKc_IRAK 374 644 - -
Vivi6g04651 713 SUPERFAMILY Protein kinase-like (PK-like) 345 645 IPR011009 -
Vivi6g04651 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 492 504 IPR008271 GO:0004672|GO:0006468
Vivi6g04651 713 Gene3D Transferase(Phosphotransferase) domain 1 446 667 - -
Vivi6g04651 713 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524
Vivi6g04651 713 FunFam Receptor-like serine/threonine-protein kinase ALE2 446 665 - -
Vivi6g04651 713 FunFam Receptor-like serine/threonine-protein kinase ALE2 348 445 - -
Vivi6g04651 713 ProSiteProfiles Protein kinase domain profile. 368 656 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04651 Vivi-Chr6 149015998 149021675 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04651 65 713 Receptor kinase-like Gene Family AT4G02010 70.399 0.0 940
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Vivi6g04651 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04651 - - gmx:100793528 1147.5