Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04617 ATGGCTTCGATTCATGGTACGGCGAGTTCAGGATCTGACGGAACGATCGACGAGAGGAAACGGAAGAGGATGCTATCGAACCGTGAATCCGCGAGACGATCACGGATGAGAAAGCAGAAACAGTTAGAGGATCTGAGCGATGAAGCAAGCAAGTTACAAATTGAGAACAAGAAACTCGCGGAGGATATAAAATCCAAGGAAGAATCGTTGATTGAAATGGAAGCTTCTAACGGCGTTATCAGAGCGAGGACTATGGAGTTAACGGAGCGGTTACGGTTTCTTAACTCGATTCTTGAAATCGCTGAAGAAGTTAGTGGATTAACGGTTGAGATTCCGGAGATTCCGGATCCGGTTCTTAATCCGTGGCGAGTTCATCATCCGATTCAACGGATTATGGCGTCTGCGGATGTGTTCTTGCATTGA 423 0.4657 MASIHGTASSGSDGTIDERKRKRMLSNRESARRSRMRKQKQLEDLSDEASKLQIENKKLAEDIKSKEESLIEMEASNGVIRARTMELTERLRFLNSILEIAEEVSGLTVEIPEIPDPVLNPWRVHHPIQRIMASADVFLH 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04617 140 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 17 74 IPR004827 GO:0003700|GO:0006355
Vivi6g04617 140 SUPERFAMILY Leucine zipper domain 19 72 IPR046347 GO:0003700|GO:0006355
Vivi6g04617 140 Coils Coil 28 76 - -
Vivi6g04617 140 Gene3D - 17 72 - -
Vivi6g04617 140 MobiDBLite consensus disorder prediction 14 48 - -
Vivi6g04617 140 FunFam BZIP transcription factor 17 68 - -
Vivi6g04617 140 Pfam bZIP transcription factor 19 73 IPR004827 GO:0003700|GO:0006355
Vivi6g04617 140 PANTHER BZIP TRANSCRIPTION FACTOR 44 9 136 - -
Vivi6g04617 140 MobiDBLite consensus disorder prediction 1 48 - -
Vivi6g04617 140 CDD bZIP_plant_GBF1 20 68 IPR045314 GO:0003700|GO:0006355
Vivi6g04617 140 SMART brlzneu 15 79 IPR004827 GO:0003700|GO:0006355
Vivi6g04617 140 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 22 37 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04617 Vivi-Chr6 148547158 148548199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04617 1 138 bZIP Transcription Factor Family AT3G62420 52.778 1.40e-46 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Vivi6g04617 bZIP_1 3.4e-11 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04617 K25786 - gmx:780550 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04617 6 148547158 148548199 Vivi6g04617 6 148547158 148548199 ECH