Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04613 ATGTACCATTTAATTTTTGAGAAAATTCAGGGCGTGCTTTCGAGTGGACAACTAATAGCTGTCAAGAGACTCTCCAAACACTCGGGACAAGGCGGAGAACAATTTAAGAATGAAGGTGAACTGGTTGCACAAGTTCAACATAGAAATTTAGCTAGGCTTCTTGGGTTTTGCATGGAAAGAGAAGAAAAGATACTTGTTTATGAATTTGTAGCCAACAAAAGTCCTGACTATATTCTTTTTGATCCTAATAAACAAAGGCTGTTGGATTGGACAAGGCACTACAAGATTATTGGAGGGATTGCTCGAGGCATTCAACATCTTTATGAAGATTCAAGGGTTAAAATTATTCATCGTGATCTCAAAGCTAGCACGTATTGTTGGAATCCGAACATCTCTGATTTTGGCATGGCAAAATTATTTGGAGTCGATCAAACTCAAGGCAACGCTTCCTGA 453 0.3863 MYHLIFEKIQGVLSSGQLIAVKRLSKHSGQGGEQFKNEGELVAQVQHRNLARLLGFCMEREEKILVYEFVANKSPDYILFDPNKQRLLDWTRHYKIIGGIARGIQHLYEDSRVKIIHRDLKASTYCWNPNISDFGMAKLFGVDQTQGNAS 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04613 150 FunFam Os07g0541700 protein 70 150 - -
Vivi6g04613 150 ProSiteProfiles Protein kinase domain profile. 1 150 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g04613 150 Gene3D Phosphorylase Kinase; domain 1 5 69 - -
Vivi6g04613 150 Gene3D Transferase(Phosphotransferase) domain 1 72 150 - -
Vivi6g04613 150 Pfam Protein kinase domain 14 142 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g04613 150 SUPERFAMILY Protein kinase-like (PK-like) 11 145 IPR011009 -
Vivi6g04613 150 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 6 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04613 Vivi-Chr6 148437285 148438208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04613 10 150 Receptor kinase-like Gene Family AT4G23190 66.897 3.90e-63 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Vivi6g04613 Pkinase 3.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04613 - - vvo:131612706 308.145