Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04601 ATGCCGGAAAAGAGAAAACAGGATAATTATGCGAAGCCGAAAAGCTTGGATTCGACCGGAATTTCAATCGGAGGAACGAATTGTAGAGCGGACTCCGAATACAAGGAAAAGATTGCTAGGAATGAGAAGAATATCCAATCCCATCTTTCGAATGCCATGTTAGAAACATCAAGAAATAAATCATTACAATTTGAGAAAAATAATGTTCAAAAACTTTCTTCAATAATGGATCATCCTATTTACAAGTTCAATGGCTCAACCACTCAAGCTTTGGAAGAAGATGACAATGTCTACATTCTAGATGCATTATTTATGGAAAGTGTCAAGATCCCATTCGTGAAAAAATTGCCACCATATACAGTTTGGATCCCTTTATCCAGAAATAAAAAAATGACGGAAGATGACTCAAGTGCTAGAAGAAAAGATGTATTTTATGATCATCGTCAAGGTGTAACAATAATATGTAGTGATAGTGATGAAGAGTTTGAACAGGACGAGAAAGCTAAATGCGCCTTTTCAGAAGGTGAAGACAAATTTTTGAGGATGGTATTTGAAGAACATGGTTTAGTTGAAGAGGTGTTGAGTATTGTTAGCAAAGCAATCGAGCACCCGAGTTCTGAAATTCTGGAGAGGTATAAAATTTTAGAGGAAAATGACCAAAGTTCTATATATCATGAAGAAAGTGAATCTCACATTGAGACATTTTTGAACAAAAGTTTGAGCGAAACTTTAGATGCTTTTGACCCTCTTTTATGTCGTAAATGCATGATCTTTAATTGTTCTTTGCATAGAAATTCTCAAAAGATAATATATCCGTTAAGACCAAAAGGTGAACAAAAACCATGTAGTGACCACTGTTACATGGCTAATTCAATGGAAGGACAAGTTGAAGAAGATTTGAGTGTTTCAAATTGGAAACTTTTGGAGAAAGAATTACACTCGAAGGGAGTAGAAATGTTTGGGAGAAATAGGCATAAAAAACAGGTCAAACCTAAGAGGCTTAAAAAATCTTCAAAGTCAGCAGGAGTTCCATCTACGTTTAAAAATATGACTAATGGGAAAGAAGCTAATATTCAATATACACCTTGTGAATGTGAAGGTTTGTGTGGAAAGAAATGTTCTTGTGTTAATAATGGATTTTGTTGTGAAAAATATTGCGGGTGTTCTAAGCTATGTATGAAACGATTTGGAGGGTGTCATTGTCTTACGGGTCAATGTAAAACTCGAAAATGTCCATGTTTTGCAGCAGATCGAGAATGTGACCCAGATATATGTCGGAATTGTTGGGTTAGTTGTGGAGACAATTTATTAGGAGAGTCATTTAATCGTGGAGAGAGTCAATGTGAAAATATGATATTTCTTTTGAAGAAAAAACAAAAGGTTCTTTTGAGAAGGTATAATGTTGTTGGATGGAGAGTTTTCTTAAAGAACCCTGTGAACAAAGATGAGTTTATAGGAGAGTACACTGGTGAAATACTCACTCATGAAGAAGGTGATATACGTGGAAAGTTATATGACAGTGCAGACTTTTCTTTTCAACTTGAATCATGATGTAAGTGTTTCAATCTTCAGTATTGCCTTGATGCTTATCGCAAAGGAAACAAGTTAAAATTCGCAAACCACTCAACAAATCCCAATTGCTATGCAAAGCTTATGTCTGTTGCTGGAGATCCAATGGGAATATTTGCAAAGAAACGCATTGAAGCCGGTGAGGAGCTTTTCGTTGATTACAACTATGATGAAAAACTTCAAAGCCAACGTTGGTTTCGTGAATTTGTAGATGAAGGTAAATCCAAGAAACGTGATCCAACATTTTCTGATAAAAAAACTAAGTTTCGTCGTTGA 1845 0.3539 MPEKRKQDNYAKPKSLDSTGISIGGTNCRADSEYKEKIARNEKNIQSHLSNAMLETSRNKSLQFEKNNVQKLSSIMDHPIYKFNGSTTQALEEDDNVYILDALFMESVKIPFVKKLPPYTVWIPLSRNKKMTEDDSSARRKDVFYDHRQGVTIICSDSDEEFEQDEKAKCAFSEGEDKFLRMVFEEHGLVEEVLSIVSKAIEHPSSEILERYKILEENDQSSIYHEESESHIETFLNKSLSETLDAFDPLLCRKCMIFNCSLHRNSQKIIYPLRPKGEQKPCSDHCYMANSMEGQVEEDLSVSNWKLLEKELHSKGVEMFGRNRHKKQVKPKRLKKSSKSAGVPSTFKNMTNGKEANIQYTPCECEGLCGKKCSCVNNGFCCEKYCGCSKLCMKRFGGCHCLTGQCKTRKCPCFAADRECDPDICRNCWVSCGDNLLGESFNRGESQCENMIFLLKKKQKVLLRRYNVVGWRVFLKNPVNKDEFIGEYTGEILTHEEGDIRGKLYDSADFSFQLESXCKCFNLQYCLDAYRKGNKLKFANHSTNPNCYAKLMSVAGDHXMGIFAKKRIEAGEELFVDYNYDEKLQSQRWFREFVDEGKSKKRDPTFSDKKTKFRR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04601 615 ProSiteProfiles CXC domain profile. 329 445 IPR026489 -
Vivi6g04601 615 SMART set_7 459 585 IPR001214 GO:0005515
Vivi6g04601 615 SUPERFAMILY SET domain 357 582 IPR046341 -
Vivi6g04601 615 SMART CXC_2 394 431 IPR033467 -
Vivi6g04601 615 Pfam SET domain 470 579 IPR001214 GO:0005515
Vivi6g04601 615 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 318 599 IPR045318 GO:0006338|GO:0042054
Vivi6g04601 615 ProSiteProfiles SET domain profile. 459 579 IPR001214 GO:0005515
Vivi6g04601 615 FunFam Putative histone-lysine N-methyltransferase EZH2 360 581 - -
Vivi6g04601 615 Gene3D SET domain 360 581 IPR046341 -
Vivi6g04601 615 Pfam CXC domain 398 429 IPR041355 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04601 Vivi-Chr6 148033765 148039991 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04601 448 578 C2H2 Transcription Factor Family AT2G23740 27.972 1.69e-09 59.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Vivi6g04601 SET 4.4e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04601 - K11430 vvo:131614966 1025