Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04578 ATGAAACGCGAATTGGATATCAGTGATAACAGCAATGACGATGATTATCAAACTAGTAACGGCCGCAGAGCTCTCCGCTCGAAGTACCTCGCCGTCAAGAACATGATTCACGGTGATGAAATGGAGAATATTGCGAAGACTGACTCTGAAGTATTTGGTTCGATTTTCAATGAAATTGAGAACTTACACCAGTCAGTCACAACAACAAGAGAACAAGTAGCTGACGCACATGCTCTTTTGGACATAACCAAATCCTTGGTAGTATCTGCAAAAGGTCATTCTAGAGATGGACTCACTCCTTCAGACTTTGTCACCAGCCTTATTGAAAAATTTGGAAAACGAGGTGGAACAAGTGCTAGTAGAAAAGATTGCAACTCAATAGCTTGGAAGGACATTGGAGTTGCAGTTTCAAGTGTTTTTGGAGGGGGATATGGGTGTTATACAATGATCGGCCCAATGGATACAAAATTAAAACAGAAGACGGTTAATAGAAAAAAGCGTTTGAAGCCTACCGAATTGGCACGGCCAGAAGAGCTTGATGAAGGTTCAAGAAAAGAGAGAAATGAAACTGATAAAACTATGTTAACTATGTTTAACATCTTAAGGAAGAATAGATCTGTCAAGCTTGAAAATTTGGTTTTGAATAAGAACTCTTTTGCGCAAACGGTAGAGAACTTATTTGCTCTCTCTTTTTTAGTCAAAGATGGGCGAGCTGAAATCAAAGTGGACAAGGCTGGACGACATCTAGTTTCGCCAAGGAATGCTCCCGCCGCAAAATCAGTAATTTCTAAGGATGTTGCTTTGAGCCACTTTGTGTTCCGACTTGACTATATTGATTGGAAGTTGATGGTTCGCTCTGTTGTTGGGGAGGAGTTGATGCCGCATAGGAATATTCAAACACAAACTTAG 909 0.4059 MKRELDISDNSNDDDYQTSNGRRALRSKYLAVKNMIHGDEMENIAKTDSEVFGSIFNEIENLHQSVTTTREQVADAHALLDITKSLVVSAKGHSRDGLTPSDFVTSLIEKFGKRGGTSASRKDCNSIAWKDIGVAVSSVFGGGYGCYTMIGPMDTKLKQKTVNRKKRLKPTELARPEELDEGSRKERNETDKTMLTMFNILRKNRSVKLENLVLNKNSFAQTVENLFALSFLVKDGRAEIKVDKAGRHLVSPRNAPAAKSVISKDVALSHFVFRLDYIDWKLMVRSVVGEELMPHRNIQTQT 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04578 302 Pfam Nse4 C-terminal 207 287 IPR014854 -
Vivi6g04578 302 MobiDBLite consensus disorder prediction 1 20 - -
Vivi6g04578 302 MobiDBLite consensus disorder prediction 166 188 - -
Vivi6g04578 302 PANTHER UNCHARACTERIZED 8 297 IPR027786 GO:0005634|GO:0006281|GO:0030915
Vivi6g04578 302 MobiDBLite consensus disorder prediction 162 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04578 Vivi-Chr6 147755391 147758796 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04578 22 297 Non-SMC Element family AT1G51130 54.480 4.02e-98 293
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04578 K22825 - gmx:100781485 386.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04578 6 147755391 147758796 Vivi6g04578 6 147755391 147758796 ECH