Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04572 ATGTATCAACATTGTTCAAGAATGTATGGAACACAGTGGGAATCCTACATGGGAATCAACAACCTAGTTAAGGTTGTTGGATCTGAACAGGTGAATTTTGAGCCAATCAAATCACCCTGCAACAACAACATTGTCGGTTCTAGTTTTCAAGGTGAAGAATACTATGATGAGGATGAGATTGAAGTTCCTGATTGGTGTTTTGATAACTTTCCAAAGATAACAGATCCTCCATTGGTGAATTGTCAAGCCTCTGGAGATAACTTCACTGCTTCACAGCTCACAAACTCCTTGTATTCTATTGATGAATCTTTGGTGTCTAATACTGAAGATAGTCATAATTCTTCTGAAGAAGAATACAGTAATTTTCAGTCTGGGAATATGTCATTTTATGATCACTTTTCGCATAAACATGATGAATTGATGAAGAAAGATGATTTCTTAGATGAGAAGAAGCCCTTTGAAATTTCCTTTCAGAGAACTGAGTCAGGGTCATGTACAAAGTCACAAAAGCATAGTCCTCAAGTCTATGGAACTACCTGTGGCGTCACTTCTAGCAACTCTGGTTCAAGAAAAGCTCTAACAAGTAAAAGAAGAATAAGATGGACAGAAGATTTGCATGAATCATTCATGATGATAGTTGATAACCTTGGTGGTCCAGAAAAAGCAAAGCCTAAGGCTATACTAGATATGATGAAATCAAAATTGTTATCACTTTCTCATGTTAAAAGTCATTTGCAGAAATGTAGGTCTACAATACGTTTACATAAAGCTTTGCAGGAAAGATCTGAGGAAGGATTTAGAACAGATAGAGCCATAGAGCTTCAACACAAAATCCTTATGCAAATCGAGGAATCGCAGAAGTTGCAACTAGAGGTTCGAAAAAGTATTTCGCAGCAGCTAGAGATGCAAAGAAATTTGCAAGCACTAATTGAAGAACATAGCAAGAAGCTCAAAGTAATGCAAAAAGAAAAAACCAACCAAGGAATATCATTGACACAACCAGAAGGTCCATAG 1014 0.3679 MYQHCSRMYGTQWESYMGINNLVKVVGSEQVNFEPIKSPCNNNIVGSSFQGEEYYDEDEIEVPDWCFDNFPKITDPPLVNCQASGDNFTASQLTNSLYSIDESLVSNTEDSHNSSEEEYSNFQSGNMSFYDHFSHKHDELMKKDDFLDEKKPFEISFQRTESGSCTKSQKHSPQVYGTTCGVTSSNSGSRKALTSKRRIRWTEDLHESFMMIVDNLGGPEKAKPKAILDMMKSKLLSLSHVKSHLQKCRSTIRLHKALQERSEEGFRTDRAIELQHKILMQIEESQKLQLEVRKSISQQLEMQRNLQALIEEHSKKLKVMQKEKTNQGISLTQPEGP 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04572 337 Coils Coil 303 323 - -
Vivi6g04572 337 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 168 323 IPR044848 GO:0003700
Vivi6g04572 337 SUPERFAMILY Homeodomain-like 194 252 IPR009057 -
Vivi6g04572 337 Gene3D - 195 252 - -
Vivi6g04572 337 NCBIfam myb-like DNA-binding domain, SHAQKYF class 196 250 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04572 Vivi-Chr6 147625015 147627618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04572 182 330 G2-like Transcription Factor Family AT4G28610 43.871 2.31e-27 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi6g04572 None None None