Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04571 ATGTATCAACATTGTTCAAGAATGTATGGAACACAGTGGGAATCCTACATGGGAATCAACAACCTAGTTAAGGTTGTTGGATCTGAACAGGTGAATTTTGAGCCAATCAAATCACCCTGCAACAACAACATTGTCGGTTCTAGTTTTCAAGGTGAAGAATACTATGATGAGGATGAGATTGAAGTTCCTGATTGGTGTTTTGATAACTTTCCAAAGATAACAGATCCTCCATTGGTGAATTGTCAAGCCTCTGGAGATAACTTCACTGCTTCACAGCTCACAAACTCCTTGTATTCTATTGATGAATCTTTGGTGTCTAATACTGAAGATAGTCATAATTCTTCTGAAGAAGAATACAGTAATTTTCAGTCTGGGAATATGTCATTTTATGATCACTTTTCGCATAAACATGATGAATTGATGAAGAAAGATGATTTCTTAGATGAGAAGAAGCCCTTTGAAATTTCCTTTCAGAGAACTGAGTCAGGGTCATGTACAAAGTCACAAAAGCATAGTCCTCAAGTCTATGGAACTACCTGTGGCGTCACTTCTAGCAACTCTGGTTCAAGAAAAGCTCTAACAAGTAAAAGAAGAATAAGATGGACAGAAGATTTGCATGAATCATTCATGATGATAGTTGATAACCTTGGTGGTCCAGAAAAAGCAAAGCCTAAGGCTATACTAGATATGATGAAATCAAAATTGTTATCACTTTCTCATGTTAAAAGTCATTTGCAGAAATGTAGGTCTACAATACGTTTACATAAAGCTTTGCAGGAAAGATCTGAGGAAGGATTTAGAACAGATAGAGCCATAGAGCTTCAACACAAAATCAGCCTTATGCAAATCGAGGAATCGCAGAAGTTGCAACTAGAGGTTCGAAAAAGTATTTCGCAGCAGCTAGAGATGCAAAGAAATTTGCAAGCACTAATTGAAGAACATAGCAAGAAGCTCAAAGTAATGCAAAAAGAAAAAACCAACCAAGGAATATCATTGACACAACCAGAAGGTCCATAG 1017 0.3687 MYQHCSRMYGTQWESYMGINNLVKVVGSEQVNFEPIKSPCNNNIVGSSFQGEEYYDEDEIEVPDWCFDNFPKITDPPLVNCQASGDNFTASQLTNSLYSIDESLVSNTEDSHNSSEEEYSNFQSGNMSFYDHFSHKHDELMKKDDFLDEKKPFEISFQRTESGSCTKSQKHSPQVYGTTCGVTSSNSGSRKALTSKRRIRWTEDLHESFMMIVDNLGGPEKAKPKAILDMMKSKLLSLSHVKSHLQKCRSTIRLHKALQERSEEGFRTDRAIELQHKISLMQIEESQKLQLEVRKSISQQLEMQRNLQALIEEHSKKLKVMQKEKTNQGISLTQPEGP 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04571 338 Coils Coil 304 324 - -
Vivi6g04571 338 Gene3D - 195 252 - -
Vivi6g04571 338 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 168 324 IPR044848 GO:0003700
Vivi6g04571 338 SUPERFAMILY Homeodomain-like 194 252 IPR009057 -
Vivi6g04571 338 NCBIfam myb-like DNA-binding domain, SHAQKYF class 196 250 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04571 Vivi-Chr6 147625015 147627620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04571 182 331 G2-like Transcription Factor Family AT4G28610 44.516 2.12e-28 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Vivi6g04571 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04571 - - psat:127126241 607.06