Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04562 ATGGCAGGAACTGCTTTCTACACCTCCTGCAATTTAGGGAAATGTTGTTTGGTATTAAAAACTCACAATACAAGAACCCTAGCAGGGAAAAAACTAGCTCAATGTCAAATGAGAAGAAACTTTACAATAAAAGCAGAAGTGGAATTTGTAACAGCTGATAAAGCTAAGGAGCTTGTAGCAGTAAAGGGGTTTAATGTTCTTGATGTTAGGGACAAAACACAGTTTGAGAGAGCTCATCTTAAAACATGTTATCATGTCCCTCTTTTTGTTGAAAATACAGACAATGATCCTGGTACATTCTTGTTAAGGACTGTCCATAATAATTTTTCTGGGTTGTTCTTTGGGATACCATTCACTAGACCAAATCCTGATTTTGTAAAATCGGTGAAAAGTCAGATATCGCCTGAAAGTAAACTATTGGTTGTATGTCAGGAAGGGTTGAGGTCTGCTGCAGCAGCAAATAAGTTAGAGGAAGCTGGTTACCAAAATATAGCATGCATATCATCTGGACTTCAAACTGTGAAACCAGGGACATTTGAATCGGTTGGTTCGACCGAGTTGCAGAATGCTGGCAAAGCTGGCTTGGTGCAAATCCAAGGAAAAATTTCAGCTGTGTTGGGAACTGTTCTTATTTGTGCATATTTATTCATCACCTTCTTTCCTGATCAAGCAGAGAAGCTGATCCAACTGGTTCCTGGAGGCTAA 705 0.3929 MAGTAFYTSCNLGKCCLVLKTHNTRTLAGKKLAQCQMRRNFTIKAEVEFVTADKAKELVAVKGFNVLDVRDKTQFERAHLKTCYHVPLFVENTDNDPGTFLLRTVHNNFSGLFFGIPFTRPNPDFVKSVKSQISPESKLLVVCQEGLRSAAAANKLEEAGYQNIACISSGLQTVKPGTFESVGSTELQNAGKAGLVQIQGKISAVLGTVLICAYLFITFFPDQAEKLIQLVPGG 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04562 234 Pfam Rhodanese-like domain 51 172 IPR001763 -
Vivi6g04562 234 CDD RHOD 55 175 - -
Vivi6g04562 234 ProSiteProfiles Rhodanese domain profile. 60 183 IPR001763 -
Vivi6g04562 234 Gene3D - 34 180 IPR036873 -
Vivi6g04562 234 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 7 232 IPR044615 -
Vivi6g04562 234 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 44 172 IPR036873 -
Vivi6g04562 234 SMART rhod_4 50 180 IPR001763 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04562 4 227 Sulfurtransferasese or Rhodanese AT2G42220 66.071 1.59e-109 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04562 - - adu:107492903 360.147
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04562 6 147544690 147546343 Vivi6g04562 6 147544690 147546343 ECH