Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04541 ATGGCTGATTACCAAGGTTACTTCATACTTTTCATCATATGGCTAATATCCACAATTTTGATAAGAGCCCTACTCAAAAGAACACATAACAAACCAAATTTACCTCCAACTCCATTTTCCTTACCTATAATAGGACACCTTCATCTCCTAGGTACAATACCTCACCAAGGTTTTCACAAACTCTCAACAAAATATGGACCTATAGTCCATCTTTTCCTAGGTTCCATCCCTTGTGTTGTAGCTTCCTCGCCCGAATCCGCCAAAGAGTTTCTTAAAACTCACGAAAACTTTTTCTCCAACCGTCCTCAAAGTTCGGCTGTTGATTATCTAACATACGGCTCACAGGATTTCTCGTTTTCACCGTATGGACCTTATTGGAAATTCATGAAGAAGATATGCATGTCTGAACTTCTTAGTGGTGTCACGTTAACTCGGCTTCTTCCTGTGAGGAAACAAGAGACAAAAAGGTTTGTTGACTTCTTGATCAAGAAAGGGAAGGCAAATGAGGCTATTGATGTTGCGAATGAGCTTTTGAGGATGTCGAATAACGTTATTTCGAGGATGATTATGAGTGAAAGTTGTAGTGAAAATGAAGGAGAGGCTGAAGAGGTGAGGAAGTTGGTGCTAGACACTGTGCATCTTACGGGGAAGTTTAATGTTTCGGATTTTATTTGGTTTTTTAAGAACTGGGATGTGCAAGGGTTTAGTAAGAGATTGAAGGAAATTAGGGATAGGTTTGATTCTATGATGGAGAGGATTATCAAGGAGCATCAAGAGAAGAGGAAGAGAAGAAAAGAAGTTGGTGGAGGAGATGGTGAAATTAAGGATCTACTTGATATTTTATTGGATATATTTGAAGATGAGAACTCCGAAATCAAATTGAAAATGGAGAACATAAAAGCCTTCATCTTGGACCTATTTATGGCTGGATCAGACACTTCAGCCCTAACCATAGAATGGGCATTGGCAGAACTAATAAACCATCCACATGAGATGGAAAGAGCAAGACAAGAGATTAATGAAGTAATTGGAAGTACTAGAATAGTAGAAGAATCAGACATTGTAAACCTCCCTTACCTACAAGCAATAGTCAAAGAAACACTAAGAATTCACCCAACAGGTCCATTAATTGTAAGAGAATCATCTGAAGAGTGCATCATACAAGGCTATGAGATTCCAGCAAAGACACAACTGTTTGTTAACATATGGTCTATTGGAAGGGACCCTAATTATTGGGATAACCCACTTGAGTTTAGGCCAGAGAGGTTTATTAGTGAAGTTGGAAATTTGGATGTGAGGGGACAACATTTTCATATGATTCCATTTGGGAGTGGGAGAAGAGGCTGCCCTGGAACTTCACTGGCTTTGCATGTTGTGCAAGCAAACCTTGCTGCTATGATTCAATGTTTTGAATGGAAAGTTAGTGGAGGTAGTGAGAGGGTTGATATGGAAGAGAAACCTGGATTAACTCTTTCAAGGGCACATCCTTTAATCTGTGTTCCTGTGCCTAGGCTTGATCCTTTTCCTTCTATGTGA 1536 0.3952 MADYQGYFILFIIWLISTILIRALLKRTHNKPNLPPTPFSLPIIGHLHLLGTIPHQGFHKLSTKYGPIVHLFLGSIPCVVASSPESAKEFLKTHENFFSNRPQSSAVDYLTYGSQDFSFSPYGPYWKFMKKICMSELLSGVTLTRLLPVRKQETKRFVDFLIKKGKANEAIDVANELLRMSNNVISRMIMSESCSENEGEAEEVRKLVLDTVHLTGKFNVSDFIWFFKNWDVQGFSKRLKEIRDRFDSMMERIIKEHQEKRKRRKEVGGGDGEIKDLLDILLDIFEDENSEIKLKMENIKAFILDLFMAGSDTSALTIEWALAELINHPHEMERARQEINEVIGSTRIVEESDIVNLPYLQAIVKETLRIHPTGPLIVRESSEECIIQGYEIPAKTQLFVNIWSIGRDPNYWDNPLEFRPERFISEVGNLDVRGQHFHMIPFGSGRRGCPGTSLALHVVQANLAAMIQCFEWKVSGGSERVDMEEKPGLTLSRAHPLICVPVPRLDPFPSM 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04541 511 CDD CYP93 66 501 - -
Vivi6g04541 511 Pfam Cytochrome P450 35 496 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PANTHER CYTOCHROME P450 93A3-LIKE 10 504 - -
Vivi6g04541 511 SUPERFAMILY Cytochrome P450 35 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 Gene3D Cytochrome P450 19 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 FunFam Cytochrome P450 family protein 26 499 - -
Vivi6g04541 511 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 442 451 IPR017972 GO:0005506|GO:0016705
Vivi6g04541 511 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04541 511 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04541 Vivi-Chr6 147278617 147280272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04541 1 504 Cytochrome P450 AT5G06900 50.198 0.0 529
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04541 K24188 - gmx:100779342 811.601