Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04522 ATGGCGCCAAAGAACAAAGCTAGGGTTTCCGATGACGAAGAAATGGAAGATCAACCTCAAAAGAGTCTCTACCAGGTTCTTGGTTTGGAGAAAACGGCTTCTCAACAGGAAATTAAAAAGGCATATTACAAGTTGGCGTTGCGGCTTCATCCCGATAAGAATCCCGATGATGAGGAGGCTAAAGAGAAATTCCAACAACTGCAAAAAGTTATTTCCATTCTCGGGGATGAAGAGAAACGAGCCCTTTATGATCAGACTGGTTGCATTGATGATGATGATCTTGCAGGAAATGTTCAGAATCTTCACGAGTTTTTCAGAACAATGTACAAGAAGGTCACTGAAGCTGATATCGAGGAGTTTGAAGCAAACTACAGGGGATCTGACTCAGAGAAGAATGACTTGATTGATTTGTACAAGAAGTGCAAGGGGAATATGAACAAGCTTTTCTGTTCAATGCTTTGTTCCGATGCTAAACTTGACTCACACCGATTCAAGGACATTCTCGACGAGGCTATAGCTGCTGGAGAACTTAAGGCAACAAAAGCCTATCAGAAATGGGCTAAGGAAGTGTCAGAAACCAAACCACCTACGAGTCCTTTAAAGAGGAAGGCAAAGTCGAACAAGCAATCTGAAACAGATCTGTTTGCAGTCATATCACAACGCCGAAATGAGAGGAAAGGCCAATTTGATTCAATGTTTTCGTCTCTAGTATCGAAGTATGGTGGTGACGATATGCAAGAGCCATCTGAAGAGGAGTTTGCAGCTGCACAGAAAAAGCTGGAGAAGGGAAGGTCTTCAAAAACACCCAAGCAATCAAAGCGAAAGTAA 828 0.4251 MAPKNKARVSDDEEMEDQPQKSLYQVLGLEKTASQQEIKKAYYKLALRLHPDKNPDDEEAKEKFQQLQKVISILGDEEKRALYDQTGCIDDDDLAGNVQNLHEFFRTMYKKVTEADIEEFEANYRGSDSEKNDLIDLYKKCKGNMNKLFCSMLCSDAKLDSHRFKDILDEAIAAGELKATKAYQKWAKEVSETKPPTSPLKRKAKSNKQSETDLFAVISQRRNERKGQFDSMFSSLVSKYGGDDMQEPSEEEFAAAQKKLEKGRSSKTPKQSKRK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04522 275 MobiDBLite consensus disorder prediction 1 20 - -
Vivi6g04522 275 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN-RELATED 13 269 IPR042977 -
Vivi6g04522 275 ProSiteProfiles dnaJ domain profile. 22 87 IPR001623 -
Vivi6g04522 275 SMART dnaj_3 21 79 IPR001623 -
Vivi6g04522 275 Pfam DnaJ domain 23 84 IPR001623 -
Vivi6g04522 275 MobiDBLite consensus disorder prediction 1 19 - -
Vivi6g04522 275 MobiDBLite consensus disorder prediction 188 275 - -
Vivi6g04522 275 Gene3D DnaJ domain 6 103 IPR036869 -
Vivi6g04522 275 PRINTS DnaJ domain signature 79 98 IPR001623 -
Vivi6g04522 275 PRINTS DnaJ domain signature 24 42 IPR001623 -
Vivi6g04522 275 PRINTS DnaJ domain signature 59 79 IPR001623 -
Vivi6g04522 275 PRINTS DnaJ domain signature 42 57 IPR001623 -
Vivi6g04522 275 SUPERFAMILY Chaperone J-domain 20 94 IPR036869 -
Vivi6g04522 275 CDD DnaJ 24 76 IPR001623 -
Vivi6g04522 275 MobiDBLite consensus disorder prediction 251 267 - -
Vivi6g04522 275 MobiDBLite consensus disorder prediction 195 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04522 Vivi-Chr6 147013790 147015936 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04522 24 84 C2H2 Transcription Factor Family AT1G74250 40.909 2.81e-08 52.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04522 6 147013790 147015936 Vivi6g04522 6 147013790 147015936 ECH