Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04471 ATGCTTCGGTCGAAGTGTCTCCTTAGGTTAGCATTGTTGCTTTGTGTTTTATTTGGCTTCTTGTTACATCCTGCTGTAACAGATGTGATAGCATTAGGTTCCAAACTCTCTGTTGTTGATAATAATTTTTGGGTTTCCACCAATCGCGATTTCGCATTCGGGTTCTTTAACGTTATTGACGAACCTAACCAGTTTAGTGTCGGCATTCGTTTCAATTCGGTGTCTATTCCTTATAGCCAACAGACACTTGTATGGATTGCTGGTGGTCATGTCAAAGTAAGCAACATGTCATATTTCCAACTTACTCCACAAGGGGAGCTCGTCTTGTTTGATTCCTTACGCGGAGTCACTGCGTGGACTAGTGGAACGGGAAACGGATCTGTTGTTTCGGCTTCTCTTAACGACGATGGAAATCTTGTTCTTGTAGACTCAAAACAAAACATGATTTGGCAAAGTTTTGATAATCCTTCTGATACACTACTCCCAGGACAGAGATTACATGTATCCAAGACACTTCGTGCTTCATCCAAGGACCTAGAGACTAGTCACTATAGTCTTTACTTGAATGCTTCTGGTCGGTTGCAGCTTCGATGGGACAGTAATGTTGTATACTGGACAGGTGAAAGCCATTCCTCTATTGCAAATGCAAATCTCACTGCATCCATCACATCCGATGGATCTCTTCAACTTCAAGACCAACATTCTATAGCTGTTTGGAGTGTGTTTGGAGAAGACCACAACGATTCTGTGAGTTATCGGTTTCTTAGGCTAGATTTTGATGGCAATCTCCGGTTATATTCATGGATGGAAGATTCTCAGTCATGGAGATCGGTTTGGCAAGCTGTTGAGAATCAATGCAAGGTCTTTGCTACTTGTGTCGACCGTGGTGTCTGCGTCTTCAATGCTTCAGGTTCGGCTGAGTGCAGGTGCCCTTTCAAGACAAACGAAACTAACAAATGTTTGGTTCCGAGTGAACAGGATTGTACTATTGGTACCTCTATGCAACGGTACGAGAACATATATCTATATGGATATTACCCTCCTGATGATTCGATTGTCACAAGTAGTTTGCAGCAATGTGAGCAGTTGTGCCATAATGACTCCATGTGTACAGTTGCAACATTTTCGAACATCGGTGGTCCACAATGTTCGATAAAGAAAACAAAATACGTAACTGGCTATACAGATCCATCTCTAAGCTCAATATCATTTGTTAAGAGTTGCTTAGATCCATTTGCCGTATACCCCAATTCGGAAAAGTCGCCTCCATCAGAATCGTCTCATCACAGGCTCTGTGTTCCTTGCTTGGTAGGAGCAGCCTCAGGAACATTTGTCATTGTTGGTTTTATCCAGCTGGGAATTGTTTTCTTCATATGTAGAAGAAAAAGTTCTACTATGAGAAGAGTCGCACTAGCATTCACGCACCCGAATTCAAAAGGTTTGATGGTGTTATCCTTTGCAGAAATCAAGAGCATCACCGGAGATCTCAAGAATCAAGTTGGGCCAAATATGTTCAAGGGTGTGCTACCGAGCAATCGTGTACTTGCAATCAAAGACCTGAATGCAACTATAGAAGAAAGGAAGTTCCGGAGCGCAGTTCTGAAGATAGGGAACATCCACCACAAGAATCTAATGAAGCTGGAGGGTTACTGCTGTGAGTTCAATCATCGATATTTGGTCTACGAATATGCCAAAAACGGCTCGTTGGACAAGTATTTAGACGATTCTACTCTTTGCAAGAAGCTTACTTGGAGAACGAGAGTTGAAATATGCTCATCTGTTGCGAAAGCTATCTGTTATTTGCATTCGGGGTGTAGGGAGTTTATAAGCCACGGAAACTTGAAATGCGAGAATGTAATGTTAGACGAAAACTCAGTTGCTAAGGTGTCTGATTACGGATTCACAATAGTTGACGGCGAGGCTACATACTGCGGCTTTTCAGCAGAAAAAGACGTAGCAGATTTCGGCAAATTAGTGTTAACCTTGTTAACCGGCTGTCGCGATCACAAACAACTCTGCGAAAGGGCTTACAAAGAATGGCTGGAAGGAAGGGTAACCAACGTGGTCGATAAAAGAATCGACGGTGGTGCTGATTTGGAGGAACTCGAACGTGCATTAAGAATCGCGTTCTGGTGCGTTCAAGTCGACGAACGGAAACGACCTTCGATGGAAGAGGTAGTGAGAGTACTAGATGGTACCCTAAATGTTGATCCACCACCACCTCCATTTGATTTGGCATTTGATCCACAAGAGAATTGTTCAGAATCAGAAATAGAATCAGTGGTTTAG 2289 0.4281 MLRSKCLLRLALLLCVLFGFLLHPAVTDVIALGSKLSVVDNNFWVSTNRDFAFGFFNVIDEPNQFSVGIRFNSVSIPYSQQTLVWIAGGHVKVSNMSYFQLTPQGELVLFDSLRGVTAWTSGTGNGSVVSASLNDDGNLVLVDSKQNMIWQSFDNPSDTLLPGQRLHVSKTLRASSKDLETSHYSLYLNASGRLQLRWDSNVVYWTGESHSSIANANLTASITSDGSLQLQDQHSIAVWSVFGEDHNDSVSYRFLRLDFDGNLRLYSWMEDSQSWRSVWQAVENQCKVFATCVDRGVCVFNASGSAECRCPFKTNETNKCLVPSEQDCTIGTSMQRYENIYLYGYYPPDDSIVTSSLQQCEQLCHNDSMCTVATFSNIGGPQCSIKKTKYVTGYTDPSLSSISFVKSCLDPFAVYPNSEKSPPSESSHHRLCVPCLVGAASGTFVIVGFIQLGIVFFICRRKSSTMRRVALAFTHPNSKGLMVLSFAEIKSITGDLKNQVGPNMFKGVLPSNRVLAIKDLNATIEERKFRSAVLKIGNIHHKNLMKLEGYCCEFNHRYLVYEYAKNGSLDKYLDDSTLCKKLTWRTRVEICSSVAKAICYLHSGCREFISHGNLKCENVMLDENSVAKVSDYGFTIVDGEATYCGFSAEKDVADFGKLVLTLLTGCRDHKQLCERAYKEWLEGRVTNVVDKRIDGGADLEELERALRIAFWCVQVDERKRPSMEEVVRVLDGTLNVDPPPPPFDLAFDPQENCSESEIESVV 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04471 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 460 563 - -
Vivi6g04471 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 155 - -
Vivi6g04471 762 Gene3D Transferase(Phosphotransferase) domain 1 641 738 - -
Vivi6g04471 762 ProSiteProfiles PAN/Apple domain profile. 328 408 IPR003609 -
Vivi6g04471 762 PIRSF SRK 640 761 IPR024171 GO:0004674
Vivi6g04471 762 PIRSF SRK 1 643 IPR024171 GO:0004674
Vivi6g04471 762 SMART blect_4 35 156 IPR001480 -
Vivi6g04471 762 ProSiteProfiles Protein kinase domain profile. 486 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g04471 762 Pfam D-mannose binding lectin 82 173 IPR001480 -
Vivi6g04471 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 643 738 - -
Vivi6g04471 762 ProSiteProfiles Bulb-type lectin domain profile. 157 278 IPR001480 -
Vivi6g04471 762 Gene3D - 154 282 IPR036426 -
Vivi6g04471 762 Gene3D - 25 153 IPR036426 -
Vivi6g04471 762 Gene3D Phosphorylase Kinase; domain 1 458 563 - -
Vivi6g04471 762 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 564 642 - -
Vivi6g04471 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 206 IPR036426 -
Vivi6g04471 762 SUPERFAMILY Protein kinase-like (PK-like) 505 730 IPR011009 -
Vivi6g04471 762 Gene3D Transferase(Phosphotransferase) domain 1 564 640 - -
Vivi6g04471 762 Pfam Protein tyrosine and serine/threonine kinase 514 635 IPR001245 GO:0004672|GO:0006468
Vivi6g04471 762 SUPERFAMILY alpha-D-mannose-specific plant lectins 174 277 IPR036426 -
Vivi6g04471 762 ProSiteProfiles Bulb-type lectin domain profile. 36 154 IPR001480 -
Vivi6g04471 762 SMART ntp_6 329 407 IPR003609 -
Vivi6g04471 762 CDD B_lectin 36 156 IPR001480 -
Vivi6g04471 762 Pfam S-locus glycoprotein domain 205 310 IPR000858 GO:0048544
Vivi6g04471 762 PANTHER OS07G0415500 PROTEIN 13 742 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04471 Vivi-Chr6 146227461 146230910 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04471 448 730 Receptor kinase-like Gene Family AT3G45860 28.528 8.52e-36 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi6g04471 PK_Tyr_Ser-Thr 2.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04471 - - gmx:100809478 1133.63