Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04470 ATGAAAATCTCAATAGTTACAACAATGTTTCAACTTGAAGGGCTTCTTCCTTATCTCTTACCTATTCTCTTATTAAACCTTCCCATAATACTCTTTTTCTTAAGAAAACCAAACAAGAAAAAATCTTCAACAAAGAGCAACATCACCATCCCAAAATCATATCCTCTTTTCGGCTCCTATTTATCTTTCAGAAAAAACCTCCACCGCCGTATCCAATGGCTCTCCGACATCGTCCAAATCTCCCCCTCCGCCACATTCCAACTCGACGGCACCTTAGGCAAACGCCAAATCATCACCGGAAACCCATCCACCGTCCAACACATTCTCAAAAACCAATTCTCCAACTACCAAAAAGGCACATCCTTCACAAACACCCTCTCCGATTTCCTAGGCACCGGAATCTTCAACACCAACGGCCAAAACTGGAAGTTCCAACGACAAGTCGCAAGCCACGAATTCAACACCAAATCAATCCGTAAATTCGTCGAACACGTCGTCGACACAGAACTCACAAACCGTTTAATCCCAATCCTCACCTCATCCACCCAAACAAACCAAATCCTCGACTTCCAAGACATTCTCCAACGTTTCACTTTCGACAACATCTGCAATATCGCCTTTGGTCACGATCCAGAGTATCTTACACCCTCAGCCAACAGATCAAAATTCGCAGAAGCATACGAAGACGCAAACGAAATAAGCAGTAAACGTTTCCGTTTACCGTTACCAATCATATGGAAGATAAAAAGATACTTCAACATTGGTTCGGAGAAACGTCTCAAAGAAGCTGTAACAGAAGTACGAGGTTTCGCGAAAAAGCTAATACGAGAAAAAAAACGAGAGTTAGAAGAGAAATCATCGCTTGAAACAGAAGATATGTTATCACGTTTCTTAAGTTCGGGCCATTCTGATGAAGATTTTGTTGCTGATATTGTGATAAGTTTTATTTTAGCAGGTAAAGATACAACTTCAGCTGCATTAACTTGGTTCTTCTGGCTGTTATGGAAGAATCCGCATGTTGAGGAAGAGATTGTGAAGGAAGTGAATGAAAAATCTGAAAGTTTGGTTTATGATGAAGTGAAGGAAATGGTTTATACTCACGCTGCATTGAGCGAGAGTATGAGATTGTATCCACCGGTACCGTTGGATAGTAAGGAGGCGATAAACGACGATGTTTTACCGGATGGGAGGGTTGTGAAAAAGGGGACAATTGTGACTTATCATGTGTATGCAATGGGGAGGATGAAGAGTTTGTGGGGGGATGATTGGGCTGAGTTTAGGCCGGAGAGGTGGTTGGAGAAGGATGAGGTGAATGGGAAGTGGGTTTTTGTGGGGAGAGATTCGTATTCTTATCCGGTTTTTCAGGCCGGGCCGAGGATATGTTTGGGGAAGGAAATGGCTTTTATGCAAATGAAGAGGGTTGTTGCGGGGATTGTTGGGAAGTTTAAGGTGGTTCCGGAGATGCATTTGGCTGAAGAACCGGGTTTTATTTCTTTTTTGAGTTCGCAGATGGAGGGTGGGTTTCCTGTCACAATTCAAAAGAGGGTTTCTTCTTGA 1557 0.4277 MKISIVTTMFQLEGLLPYLLPILLLNLPIILFFLRKPNKKKSSTKSNITIPKSYPLFGSYLSFRKNLHRRIQWLSDIVQISPSATFQLDGTLGKRQIITGNPSTVQHILKNQFSNYQKGTSFTNTLSDFLGTGIFNTNGQNWKFQRQVASHEFNTKSIRKFVEHVVDTELTNRLIPILTSSTQTNQILDFQDILQRFTFDNICNIAFGHDPEYLTPSANRSKFAEAYEDANEISSKRFRLPLPIIWKIKRYFNIGSEKRLKEAVTEVRGFAKKLIREKKRELEEKSSLETEDMLSRFLSSGHSDEDFVADIVISFILAGKDTTSAALTWFFWLLWKNPHVEEEIVKEVNEKSESLVYDEVKEMVYTHAALSESMRLYPPVPLDSKEAINDDVLPDGRVVKKGTIVTYHVYAMGRMKSLWGDDWAEFRPERWLEKDEVNGKWVFVGRDSYSYPVFQAGPRICLGKEMAFMQMKRVVAGIVGKFKVVPEMHLAEEPGFISFLSSQMEGGFPVTIQKRVSS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04470 518 CDD CYP86A 85 508 - -
Vivi6g04470 518 Coils Coil 271 291 - -
Vivi6g04470 518 PRINTS P450 superfamily signature 461 472 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PRINTS P450 superfamily signature 368 379 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PRINTS P450 superfamily signature 318 335 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PRINTS P450 superfamily signature 452 461 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PANTHER CYTOCHROME P450 38 510 - -
Vivi6g04470 518 Pfam Cytochrome P450 51 488 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 SUPERFAMILY Cytochrome P450 45 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PRINTS E-class P450 group I signature 451 461 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PRINTS E-class P450 group I signature 461 484 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PRINTS E-class P450 group I signature 327 353 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PRINTS E-class P450 group I signature 307 324 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 PRINTS E-class P450 group I signature 367 385 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04470 518 Gene3D Cytochrome P450 32 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04470 Vivi-Chr6 146211703 146213764 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04470 13 515 Cytochrome P450 AT5G63450 46.967 6.02e-161 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04470 K20769 K13407 ag:AAD10204 893.264