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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Vivi6g04441
ATGGAGAGAGGGGCGACTAAGAAGAAATCACCACCTCTCTCTTTGGACCAATTCATCTCCATCACTGCCCCTCTTCTCGATTTGGAGAAGGAGGCTGAGATATCAAGTTCAATCGCTACTGGTGCATCCAGGAATTTGGATACTGCTCAAAAGAGAGGATCAACAATCCTGAATTTGAAGTGTGTGGATGTTCAGACAGGGCTTATGGGAAAGTCTCTGATCGAGCTCCAATCCACAAAAGCAGATGTTCTTCCTGCACACAAGTTTGGTACTCATGATGTTGTTGTTTTAAAACTCAACAAGGCTGATTTAGGTTCTCCTGCTCTTGGGCAAGGTGTAGTTTACAGATTGAAGGACTCATCAATTACTGTAGCTTTTGATGATATACCAGAAGATGGTTTAAACAGTCCCCTAAGGCTGGAAAAAGTTGCAAATGAGGTGACATATCACAGGATGAAAGATGCATTAATACAGTTGAGTAAAGGTGTGCATAAGGGCCCTGCTTCTGATCTAATCCCTGTCTTGTTTGGGGAGAGGCAACCAACAGTGTCCAAGAAGGATGTATCCTTCACTTCCGTTAATAGAAATCTTGATCACTCCCAGAAAGATGCAATTTCAAAAGCCCTATCGTCGAAGAATGTTTTTTTGCTACATGGACCTCCTGGAACTGGAAAAACTACAACAGTGGTTGAAATTATATTACAAGAAGTGAAACGTGGATCTAAGATTCTCGTTTGTGCTGCCTCAAATATTGCTGTTGACAACATCGTTGAGCGGCTAGTTCCACACAGAGTTAAGCTGGTGAGGATTGGTCACCCTGCACGTTTATTGCCCCAAGTACTGGACAGTGCACTGGATGCTCAGGTACTACGAGGAGATAATAGTGGCCTTGCAAATGACATTCGGAAAGAAATGAAGGTATTGAATGGAAAGCTGCTAAAAACCAAAGAAAAAAATACGAGGAGGGAAATACAGAAGGAACTTAGGACTCTATCTAGAGAAGAGCGGAAAAGGCAACAGCTTGCTGTTACAGACGTGATTAAAACTGCAGATGTAATATTAACTACTCTGATTGGGGCTTTCACTAAGAAACTTGAGCGCACTTCATTTGATTTGGTGATTATTGACGAAGCTGCTCAAGCACTTGAGATAGCTTGTTGGATACCTCTGCTAAAGGGTACAAGATGTATACTTGCAGGAGATCATCTTCAGCTTCCTCCCACCATTCAAAGTGTTGAAGCTGAGAAGAAGGGCTTAGGAAGAACCCTCTTCGAACGACTTGCAGATCTGTATGGAGAGGAAGTCACATCTATGCTTACCGTCCAATATCGTATGCATCAACTTATCATGGATTGGTCTTCTAAAGAGCTTTACAACAGTAAGGTTAAGGCTCATCCGAGCGTTGCTGCACATACACTATATGATCTTGAGAATGTGAAGAGGACATCTTCAACTGAACCAACCATTCTTCTCATAGACACAACTGGATGTGATATGGAAGAAAAGAAAGATGAGGAAGACAGCACTCTTAACGAAGGAGAATCTGAAGTTGCTATGGCTCATGCAAAGCGATTAGTGCAAAGCGGGGTGCTTCCTTCTGATATTGGAATCATTACCCCATATGCTGCTCAGGTTGTTTTACTCAAAATGTTGAAAAACAAGGAAAACTCGCTGAAGGATATTGAGATCTCAACAGTTGATGGTTTCCAGGGAAGGGAGAAGGAGGCCATTATTATATCAATGGTTCGATCAAATTCAAAAAAGGAGGTGGGCTTTCTGAGTGATCGCAGGCGAATGAATGTGGCCGTTACACGAGCAAGAAGGCAATGCTGTATTATCTGTGACACTGAGACAGTCAGTAATGATGGATTTCTAAAGCGGTTGGTTGAATATTTTGAAGAGCACGGCGAATATCAGAGTGCATCTGAGTACCAGAATTAG
1941
0.424
MERGATKKKSPPLSLDQFISITAPLLDLEKEAEISSSIATGASRNLDTAQKRGSTILNLKCVDVQTGLMGKSLIELQSTKADVLPAHKFGTHDVVVLKLNKADLGSPALGQGVVYRLKDSSITVAFDDIPEDGLNSPLRLEKVANEVTYHRMKDALIQLSKGVHKGPASDLIPVLFGERQPTVSKKDVSFTSVNRNLDHSQKDAISKALSSKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILVCAASNIAVDNIVERLVPHRVKLVRIGHPARLLPQVLDSALDAQVLRGDNSGLANDIRKEMKVLNGKLLKTKEKNTRREIQKELRTLSREERKRQQLAVTDVIKTADVILTTLIGAFTKKLERTSFDLVIIDEAAQALEIACWIPLLKGTRCILAGDHLQLPPTIQSVEAEKKGLGRTLFERLADLYGEEVTSMLTVQYRMHQLIMDWSSKELYNSKVKAHPSVAAHTLYDLENVKRTSSTEPTILLIDTTGCDMEEKKDEEDSTLNEGESEVAMAHAKRLVQSGVLPSDIGIITPYAAQVVLLKMLKNKENSLKDIEISTVDGFQGREKEAIIISMVRSNSKKEVGFLSDRRRMNVAVTRARRQCCIICDTETVSNDGFLKRLVEYFEEHGEYQSASEYQN
646
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Vivi6g04441
646
FunFam
DNA-binding protein SMUBP-2
41
143
-
-
Vivi6g04441
646
FunFam
P-loop containing nucleoside triphosphate hydrolase
443
646
-
-
Vivi6g04441
646
NCBIfam
IGHMBP2 family helicase
345
642
IPR004483
GO:0003677|GO:0005524
Vivi6g04441
646
SMART
AAA_5
211
433
IPR003593
GO:0016887
Vivi6g04441
646
CDD
SF1_C_Upf1
445
633
IPR047187
-
Vivi6g04441
646
SMART
ultradead3
193
444
IPR014001
-
Vivi6g04441
646
Pfam
AAA domain
420
616
IPR041679
-
Vivi6g04441
646
CDD
DEXXQc_SMUBP2
196
444
-
-
Vivi6g04441
646
Coils
Coil
298
337
-
-
Vivi6g04441
646
Pfam
AAA domain
197
411
IPR041677
GO:0004386
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Vivi6g04441
Vivi-Chr6
145891466
145898925
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Vivi6g04441
170
380
Core DNA Replication Machinery Family
AT1G08840
27.014
6.54e-12
67.0
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Vivi6g04441
-
K19036
gmx:100810545
1144.41
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