Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04431 ATGCTTCGATCGGAGTGTCTCGTTAGGTTAGCATTGTTGCTTTGTGTTTCATTTGGCTTCTTGTTACATCCTGCTGTAACAGATGTGATAGCATTGGGTTCCAAACTCTCTGTTGTTGATAATAATTTTTGGGTTTCCACCAATCGCGATTTCGCATTCGGGTTCTTTAACATTGCTGACGAACCTAACCAGTTTAGTGTCGGTATTCGTTTCAATTCAAAGTCTATTCCGTATAACCAACAGACACTTGTATGGATTGCTGGTGGTCATGTCAAAGTAAGCAACATGTCGTATTTCCAACTTACTCCACAAGGGGAGCTCGTCTTGTATGATTCCTTGCACGGAGTCACTGCGTGGACTAGTGGAACGGGAAACGGATCTGTTGTTTCGGCTTCTCTTAACGACGATGGAAATCTTGTTCTTGTAGACTCAAAACAAAACATGATTTGGCAAAGTTTTGATAATCCTTCTGATACACTACTCCCAGGACAGAGATTACATGTATCCAAGACACTTCGTGCTTCATCCAAGAACCTAGAGACTAGTCACTATAGTCTTTACTTGAATGCTTCTGGTCGGTTGCAGCTTCGATGGGACAGTAATGTTGTATACTGGACAGGTGAAAGCCATTCCTCTATTGCAAATGCAAATCTCACTGCATCCATCACATCCGATGGATCTCTTCAACTTCAAGACCAACATTCTAGAGCTGTTTGGAGTGTGTTTGGAGAAGACCACAACGATTCTGTGAGTTATCGGTTTCTTAGGCTAGATTTTGATGGCAATCTCCGGTTATATTCATGGATGGAAGATTCGCAGTCATGGAGATCGGTTTGGCAAGCTGTTGAGAATCAATGCAAGGTCTTTGCTACTTGTGTCGACCGTGGTGTCTGCATCTTCAATACTTCAGGTTCGGCTGAGTGCAGGTGCCCTTTCAAGACAAACGAAACTAACAAATGTTTGGTTCCGAGTGAACAGGATTGTACTATTGGTACCTCTATGCAACGGTACGAGAACATATATCTATATGGATATTACCCTCCTGATGATTCGATTGTCACAAGTAGTTTGCAGCAATGTGAGCAGTTGTGCCATAATGACTCCGAGTGTACAGTTGCAACATTTTCGAACATCGGTGGTCCAAAATGTTCGATAAAGAAAACAAAATACGTAACTGGCTATACAGATCCATCTCTAAGCTCAATATCATTTGTTAAGAGTTGCTTAGATCCATTTGCCGTATACCCAGATTCGGAAAAGTCGCCTCCATCAGAATCATCTCATCACAGGCTCTGTGTTCCTTGCTTGGTAGGAGCAGCCTCAGGAACATTTGTCATTGTTGGTTTTATCCAGCTGGGAATTGTTTTCTTCATATGTAGAAGAAAAAGTTCTACTATGAGAAGAGTCACACTAGCATTCACGCACCCGAATTCAAAAGGTTTGATGGTGTTATCCTTTGCAGAAATCAAGAGCATCACCGGAGATCTCAAGAATCAAGTCGGGCCAAATATGTTCAAGGGTGTGCTACCGAACAATCGTGTACTTGCAATCAAAGACCTGAATGCATCCATAGAAGAAAGGAAGTTCCGGACCGCTGTTATGAAGATAGGGAACATCCACCACAAGAACCTAATGAAGCTTGAAGGTTACTGTTGTGAGTTCAATCATCGGTATCTGGTCTACGAATATGCCAAGAATGGTTCGTTGGACAAGTATTTAGACGATTCTACTCTTTGCAAGAAGCTTACTTGGAGAACGAGAGTTGAAATATGCTCATCTGTTGCGAAAGCGATCTGTTATTTGCATTCGGGGTGTAGGGAGTTTATAAGCCACGGAAACTTGAAATGCGAGAATGTAATGTTAGACGAAAACTCAGTTGCTAAGGTGTCTGATTACGGATTCACAATAGTTGACGGCGAGGCTACATACTGCGGCTTTTCAGCAGAAAAAGACGTAGCAGACTTCGGCAAACTAGTGATAACCTTGTTAACCGGGTGTTGCGATCACGATCACGGACAAGTCTGCAAAAGGGCTTACAAAGAATGGCTGGAAGGAAGGATAACCAACGTGGTCGATAAAAGAATCGACGGTGGTGCTAATTCGGAGGAACTCGAACGTGCATTAAGAATCGCGTTCTGGTGCGTTCAAGTCGATGAACGGAAACGACCTTCGATGGAAGAGGTAGTGAGAGTACTAGATGGTACACTGAATGTTGATCCACCACCACCTCCATTTCATTTGGCATTTGATCCACAAGAGAATTGTTCAGAATCAGAAATAGAATCAGTGGTTTAG 2295 0.4275 MLRSECLVRLALLLCVSFGFLLHPAVTDVIALGSKLSVVDNNFWVSTNRDFAFGFFNIADEPNQFSVGIRFNSKSIPYNQQTLVWIAGGHVKVSNMSYFQLTPQGELVLYDSLHGVTAWTSGTGNGSVVSASLNDDGNLVLVDSKQNMIWQSFDNPSDTLLPGQRLHVSKTLRASSKNLETSHYSLYLNASGRLQLRWDSNVVYWTGESHSSIANANLTASITSDGSLQLQDQHSRAVWSVFGEDHNDSVSYRFLRLDFDGNLRLYSWMEDSQSWRSVWQAVENQCKVFATCVDRGVCIFNTSGSAECRCPFKTNETNKCLVPSEQDCTIGTSMQRYENIYLYGYYPPDDSIVTSSLQQCEQLCHNDSECTVATFSNIGGPKCSIKKTKYVTGYTDPSLSSISFVKSCLDPFAVYPDSEKSPPSESSHHRLCVPCLVGAASGTFVIVGFIQLGIVFFICRRKSSTMRRVTLAFTHPNSKGLMVLSFAEIKSITGDLKNQVGPNMFKGVLPNNRVLAIKDLNASIEERKFRTAVMKIGNIHHKNLMKLEGYCCEFNHRYLVYEYAKNGSLDKYLDDSTLCKKLTWRTRVEICSSVAKAICYLHSGCREFISHGNLKCENVMLDENSVAKVSDYGFTIVDGEATYCGFSAEKDVADFGKLVITLLTGCCDHDHGQVCKRAYKEWLEGRITNVVDKRIDGGANSEELERALRIAFWCVQVDERKRPSMEEVVRVLDGTLNVDPPPPPFHLAFDPQENCSESEIESVV 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04431 764 SMART ntp_6 329 407 IPR003609 -
Vivi6g04431 764 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 206 IPR036426 -
Vivi6g04431 764 Gene3D Phosphorylase Kinase; domain 1 458 563 - -
Vivi6g04431 764 Pfam D-mannose binding lectin 82 173 IPR001480 -
Vivi6g04431 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 564 642 - -
Vivi6g04431 764 SUPERFAMILY Protein kinase-like (PK-like) 505 732 IPR011009 -
Vivi6g04431 764 ProSiteProfiles Bulb-type lectin domain profile. 29 154 IPR001480 -
Vivi6g04431 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 460 563 - -
Vivi6g04431 764 PANTHER OS07G0415500 PROTEIN 12 745 - -
Vivi6g04431 764 Gene3D - 157 283 IPR036426 -
Vivi6g04431 764 Pfam Protein tyrosine and serine/threonine kinase 514 635 IPR001245 GO:0004672|GO:0006468
Vivi6g04431 764 ProSiteProfiles PAN/Apple domain profile. 328 408 IPR003609 -
Vivi6g04431 764 CDD B_lectin 36 156 IPR001480 -
Vivi6g04431 764 Gene3D - 25 154 IPR036426 -
Vivi6g04431 764 Pfam S-locus glycoprotein domain 205 310 IPR000858 GO:0048544
Vivi6g04431 764 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 277 IPR036426 -
Vivi6g04431 764 ProSiteProfiles Bulb-type lectin domain profile. 157 278 IPR001480 -
Vivi6g04431 764 SMART blect_4 35 156 IPR001480 -
Vivi6g04431 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase SD3-1 643 740 - -
Vivi6g04431 764 ProSiteProfiles Protein kinase domain profile. 486 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g04431 764 PIRSF SRK 1 763 IPR024171 GO:0004674
Vivi6g04431 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 155 - -
Vivi6g04431 764 Gene3D Transferase(Phosphotransferase) domain 1 641 740 - -
Vivi6g04431 764 Gene3D Transferase(Phosphotransferase) domain 1 564 640 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04431 Vivi-Chr6 145818314 145821731 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04431 374 734 Receptor kinase-like Gene Family AT5G45780 31.579 1.00e-38 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi6g04431 PK_Tyr_Ser-Thr 1.9e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04431 - - gmx:100809478 1147.11