Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04428 ATGTTTCATCTTGAAGATCTTCTTCCTTATCTCTTACCTATTCTCTTATTAAACCTTCCCATAATACTCTTTTTCTTAACAAAACCAAACAAGAAAGTATCTTCAACCACCATCCCAAAATCATACCCTCTTATCGGCTCCTACTTATCTTTCAGAAAAAACCTTCACCGCCGTATCCAATGGCTCTCCGACATAGTCCAAATCTCCCCCTCCGCCACATTCCAACTCGACGGCACCTTAGGCAAACGCCAAATCATCACCGGAAACCCATCCACCGTCCAACACATTCTCAAAAACCAATTCTCCAACTACCAAAAAGGCACATCCTTCACAAACACCCTCTCCGATTTCCTAGGTACCGGAATCTTCAACACCAACGGCCAAAACTGGAAGTTCCAACGACAAGTCGCAAGCCACGAATTCAACACCAAATCAATCCGTAACTTCGTCGAACACATCGTCGACACAGAACTCACCCACCGTTTAATCCCAATCCTCACTTCATCCACCCAAACAAACCAAATCCTCGACTTCCAAGACATTCTCCAACGTTTCACTTTCGACAACATCTGCAATATTGCCTTTGGTCACGATCCAGAGTATCTTACACTCTCAACCAACAGATCAAAATTCGCAGAAGCATACGAAGACGCAAACGAAATAAGCAGTAAACGTTTCCGTTTACCGCTACCAATCATATGGAAAATCAAAAGATACTTCAATATAGGTTCGGAGAAGCGTCTCAAGGAAGCAGTAACAGAAGTACGAGGTTTCGCGAAAAAGCTAATACGAGAGAAAAAACGAGAGTTAGAAGAGAAATCATCGCTTGAAACAGAAGATATGTTATCGCGGTTCTTAAGTTCAGGCCATTCAGATGAGGATTTTGTTGCTGATATTGTAATAAGTTTTATTTTAGCAGGTAAGGATACAACTTCAGCTGCATTGACTTGGTTCTTCTGGCTATTATGGAAGAATCCGCGTGTTGAGGAAGAGATTGTGAAGGAAGTGAATGAAAAATCTGAAAGTTTGGTTTATGATGAAGTGAAGGAAATGGTTTATACTCACGCTGCATTGAGCGAGAGTATGAGATTGTATCCACCGGTGCCGTTGGATAGTAAGGAGGCGATAAACGACGATGTTTTACCGGATGGGAGGGTTGTGAAAAAGGGGACAATTGTGACTTATCATGTGTATGCAATGGGGAGGATGAAGAGTTTGTGGGGGGATGATTGGGCTGAGTTTAGGCCGGAGAGGTGGTTGGAAAAGGATGAGGTGAATGGGAAGTGGGTTTTTGTGGGGAGAGATTCGTATTCTTATCCGGTTTTTCAGGCCGGGCCGAGGATTTGTTTGGGGAAGGAAATGGCTTTTATGCAAATGAAGAGGGTTGTTGCGGGGATTGTTGGGAAGTTTAAGGTTGTTCCGGAGATGCATTTGGCTGAAGAACCGGGTTTTATTTCTTTTTTGAGTTCGCAGATGGAGGGTGGGTTTCCTGTCACAATTCAGAAGAGGGTTTCTTCTTGA 1521 0.4326 MFHLEDLLPYLLPILLLNLPIILFFLTKPNKKVSSTTIPKSYPLIGSYLSFRKNLHRRIQWLSDIVQISPSATFQLDGTLGKRQIITGNPSTVQHILKNQFSNYQKGTSFTNTLSDFLGTGIFNTNGQNWKFQRQVASHEFNTKSIRNFVEHIVDTELTHRLIPILTSSTQTNQILDFQDILQRFTFDNICNIAFGHDPEYLTLSTNRSKFAEAYEDANEISSKRFRLPLPIIWKIKRYFNIGSEKRLKEAVTEVRGFAKKLIREKKRELEEKSSLETEDMLSRFLSSGHSDEDFVADIVISFILAGKDTTSAALTWFFWLLWKNPRVEEEIVKEVNEKSESLVYDEVKEMVYTHAALSESMRLYPPVPLDSKEAINDDVLPDGRVVKKGTIVTYHVYAMGRMKSLWGDDWAEFRPERWLEKDEVNGKWVFVGRDSYSYPVFQAGPRICLGKEMAFMQMKRVVAGIVGKFKVVPEMHLAEEPGFISFLSSQMEGGFPVTIQKRVSS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04428 506 CDD CYP86A 73 496 - -
Vivi6g04428 506 PRINTS P450 superfamily signature 449 460 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PRINTS P450 superfamily signature 440 449 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 Pfam Cytochrome P450 39 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PRINTS E-class P450 group I signature 439 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PRINTS E-class P450 group I signature 449 472 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 PANTHER CYTOCHROME P450 30 498 - -
Vivi6g04428 506 SUPERFAMILY Cytochrome P450 37 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi6g04428 506 Coils Coil 259 279 - -
Vivi6g04428 506 Gene3D Cytochrome P450 27 505 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04428 Vivi-Chr6 145803831 145805801 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04428 5 503 Cytochrome P450 AT5G63450 47.441 8.43e-162 469