Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04400 ATGGTGTCATTGCTCTTCGACTTGGCAGAGACACTGATAGCAAAGGTTGCTTCTCGGGCATGTGAAGAAGCATTTCAGGTGCTGTGTGTATATTCTGATATTCTACGGTTCACACAGACTATTTCATACATCAAATCTGTGCTGATGGATGCTGAACAAAAGCCGAAAAATTTCGAGCAGGAGAATTGGCTGTGGCAGGTAGCAAACGTCCTCATAGATGCGGAAAATTTGCTTGATGAAGTTGAGTTTCAAAACCTAAGAAAGAAAGCGATCAAAGCTAATGTTAGCATGATGATAACCAAGGTATATCTATACCACTTATTCTCATGTTCTAATCCAATTGCTTTTCGATTTAGAGTGGCTCGAAAAATTAATGAAATCAACAGGCGGTTAGACAACATTGCAGCTAATAGGAATAAGTTTGGTTTTCAGACAATTGAAACTCACAATGACACACGTATAGCGCACAGGGGAGAAATGACATACTCCCGTGTGATTAATTCAGAAGTGATTGGAAGAGAACATGATAAAGAAAAGATTGTCAAGCTTTTGGCTCAACATGACAATAATGATAAAAATCTCTCTGTTATTCCCATTGCGGGGCTTGGCGGGGTTGGAAAGACCACTCTTGCAAAGTTTGTGTTTAATGATGACAAGATAAGTGAGTGTTTCTCATCCAAGATGTGGGTGTGTGTTTCAGGAAGCTTTGACATTAAAGAAGTGATTATTAAGATCATCAATTCTGCTAATGACTCTGCTAAAGTGGATGTTCCTGCTTACCAACAAAATTATAGAGATTTAGATATCGAGCAACTGCAAAATCATCTTACAAACAAACTTAATGGTCAAAAGTTTCTACTTGTCCTAGACGACGTGTGGAATGAAGATCGTGTTCAATGGACCGAGGTGAGGGATTTACTACAAGTGGGTGCTCTAGGAAGTAAAATCTTAATTACTACACGCAGTCACTCGATTGCTTCCATGATGGGAACCGTTTCCTCGCATAGTTTAGAAGGTCTTTCTCTTGAAGATTCATTGTCTATATTTGTCAAATGGGCCTTTAAAGAAGGAGAAGCAATGAGGTATCCACATTTGGTAAATATTGGAAGGGAAATTGTGAAAAAATGTGGTGGGATTCCCTTGGCAGTGAGAACAGTAGGAAGTTTACTTTTTTCAAAATATGAGACAGCCGAGTATTGGGAAAATGTGAGAGACAACGAAATTTGGAATTCACCAGATACAGTTGGGATTTTACCATCACTTAAGTTAAGCTATGATCAAATGCCATCTGCTCTGAAGAAATGCTTTGCTTTGTTCTCCATTTACCCATATGGTCATGCATTTGATAGTTTTCATGTAACATCACTATGGAGAGCACTTGGTTATCTTCCAGCTCCAAACAGAAATCAAAATCAAACATTGAAATATAGTGCCAACCAATATTTGTTTGAACTGTTGTCAATATCTTTTCTTCAAGATTTTGTCGACTATGGAATTGGTTTCACTTTCAAAATGCATGATTTGGTGCATGATTTGGCAAAGTATGTTGCAAGGAAGGACTTTGTGTCAGCTAATCCCTATTTCAAGCATTGGTCTTGGACTGAAAACACAGGGTTTCAAAAAAATCCCTTCCAAAATTTAAAATTTGCAAAGAGCATACTATTTCCTATTGCTGAAGTTGGACCAAACAGTAAAGCTCTCTTGAATAGACGCATATCAACATGTAAACACCTACGGTTTTTTGATTTAAGCTATTCTACGTATGAGACCTTGCCTTGGGCCATTGGGAAGCTGGTGCTTTTAAGATATCTCAGTCTTGAGAATAATAAAAAGATTAAGAGACTTCCAGATTCTATTTGCAGCCTCCAGAGCTTAGAAATATTGATACTTAGTGGCTGCACAGAACTTGAGACACTTCCTAAAGGCTTAGAAAACTTGATCAATCTCCAACATTTGGAGATAACAACAAAGCAGCATGTTTTGCCAGAGGATGAGATTGCAAACTTGAGGTCTCTTCACACTCTCAGAATCGAGTTTTGCAGCAATCTAGAGTCATTATTTGCAAGGATAAAACTCTCAACTCTCAAAGTATTGTGTATTGCTAATTGTAGTGCTCTAAAGTCTTTGCCACTTGATATTGAACATTTTCCTGCATTAGAGACATTGCTAGTGGACAACTGTGACATGTTGGAACTTTCAGAGGGACATGAGGAACAAAACTCCAGCTTGAGATTGAAGGTTCTAGTTATTGTTTCTATGCTGCAGTTGGTGATCTTTCCTCATTGGCTTCAAGGGTCCTTGAATACATTACAATACTTGTCAATTTCAAGCTGCAACAATCTTGTGGCACTTCCACAGTGGCTGTCAGATATGAACAGCCTGAAAACACTATATATCATAGGCTGTCCTAATATAATGTCTCTCCCTAATGACTTTCATCGCCTCGTCAACCTTGAACGAGTAGAAATCGATGGTCATCTTGAATTGCTTATAAAACCTCAGCTGGAAATTGGAGAGTCATCTCGCCCACACAATGCCGCAGATGAACCAGACGAAGTGGTAGAAGAATTGGAATAA 2577 0.3857 MVSLLFDLAETLIAKVASRACEEAFQVLCVYSDILRFTQTISYIKSVLMDAEQKPKNFEQENWLWQVANVLIDAENLLDEVEFQNLRKKAIKANVSMMITKVYLYHLFSCSNPIAFRFRVARKINEINRRLDNIAANRNKFGFQTIETHNDTRIAHRGEMTYSRVINSEVIGREHDKEKIVKLLAQHDNNDKNLSVIPIAGLGGVGKTTLAKFVFNDDKISECFSSKMWVCVSGSFDIKEVIIKIINSANDSAKVDVPAYQQNYRDLDIEQLQNHLTNKLNGQKFLLVLDDVWNEDRVQWTEVRDLLQVGALGSKILITTRSHSIASMMGTVSSHSLEGLSLEDSLSIFVKWAFKEGEAMRYPHLVNIGREIVKKCGGIPLAVRTVGSLLFSKYETAEYWENVRDNEIWNSPDTVGILPSLKLSYDQMPSALKKCFALFSIYPYGHAFDSFHVTSLWRALGYLPAPNRNQNQTLKYSANQYLFELLSISFLQDFVDYGIGFTFKMHDLVHDLAKYVARKDFVSANPYFKHWSWTENTGFQKNPFQNLKFAKSILFPIAEVGPNSKALLNRRISTCKHLRFFDLSYSTYETLPWAIGKLVLLRYLSLENNKKIKRLPDSICSLQSLEILILSGCTELETLPKGLENLINLQHLEITTKQHVLPEDEIANLRSLHTLRIEFCSNLESLFARIKLSTLKVLCIANCSALKSLPLDIEHFPALETLLVDNCDMLELSEGHEEQNSSLRLKVLVIVSMLQLVIFPHWLQGSLNTLQYLSISSCNNLVALPQWLSDMNSLKTLYIIGCPNIMSLPNDFHRLVNLERVEIDGHLELLIKPQLEIGESSRPHNAADEPDEVVEELE 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04400 858 FunFam Probable disease resistance protein At1g61300 153 334 - -
Vivi6g04400 858 Gene3D Ribonuclease Inhibitor 539 839 IPR032675 -
Vivi6g04400 858 Gene3D - 159 334 IPR027417 -
Vivi6g04400 858 PRINTS Disease resistance protein signature 196 211 - -
Vivi6g04400 858 PRINTS Disease resistance protein signature 279 293 - -
Vivi6g04400 858 PRINTS Disease resistance protein signature 376 390 - -
Vivi6g04400 858 PRINTS Disease resistance protein signature 620 636 - -
Vivi6g04400 858 SUPERFAMILY L domain-like 504 825 - -
Vivi6g04400 858 Gene3D - 425 515 IPR036388 -
Vivi6g04400 858 Pfam Rx N-terminal domain 10 90 IPR041118 -
Vivi6g04400 858 Coils Coil 74 94 - -
Vivi6g04400 858 Pfam NB-ARC domain 173 406 IPR002182 GO:0043531
Vivi6g04400 858 Gene3D - 339 424 IPR042197 -
Vivi6g04400 858 PANTHER DISEASE RESISTANCE PROTEIN RP 62 736 IPR044974 GO:0006952
Vivi6g04400 858 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 159 438 IPR027417 -
Vivi6g04400 858 Gene3D - 9 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04400 Vivi-Chr6 144504744 144508306 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04400 193 819 WRKY Transcription Factor Family AT5G45050 21.793 2.60e-15 79.0