Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04373 ATGGGAACTGCTTCGCGGCAGTTCAAGATTATGCTCAAAAAGAACTGCCTCCTCAAAATTCGTCATCCTTTCGTTACTGCTACTGAGATTTTGCTCCCTGCGATTGTGTTGCTGCTATTAGCAGCTGTAAGAATGGGAGTGGATACGCAAATTCATCCAGATCAATCGCACATTCAAAAAGATATGTTTGTAGAAGTGGGGAAAGGAATATCCCCTAACTTTCAACAAGTTTTGGAATCCTTATTGGATAAGAGAGAGTATTTAGCTTTTGCACCAGACACCGATGAGACAAGGATGATGATAGACGTGCTGTCGATCAAATTTCCAATTTTGAAGCTTGTGAGTATTGTATACAAAGATGAGTTAGAGTTGGAGACGTACATCCGGTCTGATGCTTATGGTATCTGCAAAGACGTTAGGAATTGTTCAAATCCCAAAATTAAAGGAGCAGTTGTATTTTACGAACAAGGTCCTCAGTCATTTGATTATAGCATACGCCTCAATCATACATGGGCTTTCTCCGGTTTTCCGGATATTACAACAATAATGGATACAAATGGCCCTTTTCTCAATGACTTGGAACTTGAAGTTAGTGCTGTACCAACAATGCAATACAGCTTCAGTGGGTTTTTGACACTCCAGCAAGTGGTTGATTCGTATATATTATTTATAGCTCAACAACCTGAATTAAACTCAAATGCCGAAACTGTAAAGCTTCCTCTTTTAGGATTTAATGACACTGATTTCTCGCTAAAAGTTCCATGGACTCAGTTTAACCCTACTAACATACGAATAGCTCCATTTCCCACTCGAGAGTACACTGATGACCAATTCCAAGCAATAGTAAAGAAAGTCATGGGAATATTGTATTTATTGGGGTTTCTCTATCCAGTTTCTCGCCTGATAAGTTATTCTGTGTTTGAAAAGGAACAAAAGATCAAAGAAGCACTCTATATGATGGGCTTAAAAGATGGCATTTTTCATCTCTCTTGGTTTGTCACGTATGCTTTGCAGTTTGCAATTTCTTCTGCGGTCATTACAGCTTGTACCATGGATAATATATTCAAATATAGTGATAAGACACTGGTGTTTGCATACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTGTCTTTTTTGATATCCACCTTTTTCAAAAGGGCCAAAACAGCTGTAGCTGTTGGAACTCTGTCATTTCTTGGTGCCTTTTTCCCTTATTACACTGTCAACGATGAGGGAGTCTCTATGATCTTGAAGGTTCTTGCTTCTCTACTTTCACCTACGGCATTTGCTCTGGGTTCTGTCAACTTTGCTGATTATGAGCGTGCTCATGTTGGGCTTCGTTGGAGCAACATATGGCGAGAGTCCTCTGGAGTGAACTTTTTAGCTTGTCTTCTAATGATGATACTTGATACACTGCTCTATTGTGCAATTGGACTGTATTTTGATAAGGTTCTTCCAAGGGAGCATGGAATGCAATATCCATGGAACTTTATTTTCAAAAAAGACTTTGGGAGAAAGAAAAAAATTGAAGAAAATTGTTCCTCCAGTTTTAAAGTTAAAGTTACTGGTAATAGTTCTGAGCCAGAAAGGAATCTTTTTGGGCAAGATACTACCAATCCTGCTATAGAAGCAATAAGCTTAGACATGAAACAACAGGAGCTTGATGGAAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGATACTAAAAAAGGAGATTGCTGTGCTGTTAATTCATTGCAACTGACATTATATGAAAATCAGATTCTTGCTCTTCTAGGACATAATGGAGCTGGGAAAAGCACGACAATATCAATGCTTGTTGGTCTTCTTCCTCCTACTTCTGGGGATGCTTTGATTTTTGGAAAGAATATTGTCTCTGATATTGATGAGATACGGAAGGTTTTGGGTGTTTGTCCACAACATGATATACTCTTTCCTGAATTGACTGTGAGAGAGCATTTAGAACTATTTGCTATATTAAAGGGTGTGGAGGAAGACACTCTGGAGAATGTTATTATTAATATGGCCGATGAGGTGGGCCTGGCAGATAAAATCAACACTGTTGTGAGTTCTCTTTCTGGTGGCATGAAGAGGAAATTGTCTCTTGGAATCGCATTAGTTGGAAACAGTAAGGTTATAATTCTTGACGAGCCTACAAGTGGAATGGATCCATATTCGATGCGATTGACTTGGCAGTTAATAAAAAAAATTAAGAAGGGCAGAATAATTTTGCTTACAACACATTCCATGGACGAAGCAGATGAACTAGGTGACCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCCCTTTTCTTGAAGCATCATTATGGAGTTGGTTACACTTTAACTCTTGTAAAGTCTGCTCCTACTGCTTCTATAGCTGGTGATATTGTATACCGATATATTCCAACAGCAACCTGTATAAGTGAGGTTGGAACTGAGATTTCCTTCAGACTCCCTATGGCATCCTCCTCAACCTTTGAGAGGATGTTCAGGGAAATTGAAGGTTGCATGAAAAAACCACTTTTAAGCATGGAAATAAGTGACAGTTGTGAAAAAGACAGTCATGGTATTGAAAGTTATGGTATATCTGTAACAACCCTGGAGGAGGTATTCTTGAGAGTTGCTGGATGTGACTATGATGAAGTTGAATGCTCTGAAGAAACTAACCGCTCCCTTATATCAGAACCTGTAGTTTCTCTTGCTTCTGATGATTGTCCATCCACAAAAATATGTTATTATAAAGTTTTTGGAAATTATAAGAAGGTTATTGGCTTCATGTCTACGATGGTGGGGAGAGCTTGTGATTTAATATTTGCTGCAGTTATTAGTTTTATCAACTTCATTGGCATGCAGTGTTGTAGCTGCTGTCTCATTACTAGGTCCACTTTTTGGCAGCATTCTAAAGCTTTATTTATTAAGAGGGCAATATCTGCTCGCAGAGATCACAAAACAATTATGTTTCAACTAATAATTCCTGCTATCTTCTTGTTTATTGGTCTTTTATTTATGGAGCTCAAGCCACATCCTGATCAGATTTCACTGACTCTTTCAACATCTAATTTTAATCCTCTATTGAGCGGTGGGGGTGGGGGTGGTCCAATTCCGTTTAACCTATCTTTTCCAATTGCAGAAAAGGTAGCACAAAATGTCAAAGGAGGTTGGATTCAAAGTTGCAACCCAAGCTCATACAAATTCCCCAATTCAGAAAAGGCATTAACTGATGCAATGGAAGCAGCAGGGCCAACTTTGGGACCTGCTCTACTTTCAATGAGTGAATATTTAATGTCTAGCTTTAATGAATCCTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAAAACACTGATGGAAGCTTAGGCTACACCGTATTACACAACTTTTCTTGTCAGCATGCTGCTCCCACCTTTATCAATTTGATGAATTCTGCAATTCTTAGGCTTGCTACTCATGACATGAATGCCACAATTCAGACACGCAACTACCCTCTACCAATGACACAAAGCCAGCACTTACAACGTCATGACCTGGATGCTTTCTCTGCTGCCATCATTGTCAACATAGCCTTCTCTTTCATTCCTGCTTCATTTGCTGTTTCAATTGTTAAGGAACGAGAAGTGAAAGCTAAGCATCAACAACTAATCAGTGGGGTTTCAGTCCTTTCATATTGGGTGTCTATATTTATTTGGGACTTCGTGAGCTTCTTGTTTCCGGCCTCTTTTGCCATAGTTCTCTTTTACATCTTTGGTCTGGATCAGTTTGTTGGGGGAGTTTCTTTGGTACCAACTATCATCATGCTTTTGGAATATGGACTTTCAATTGCTTCGTCAACTTATTGCCTTACATTTTTCTTTTTTGACCACACTGTGGCCCAGAACGTGGTTCTCCTGGTCCACTTTTTTTCGGGATTGATACTAATGGTTATCTCATTCGTTATGGGACTCTTCCCATCCACAATAAGCGCCAATTCTTTTCTTAAGAACTTTTTCAGAATATCTCCTGGATTTTGTTTTGCTGATGGACTTGCTTCATTAGCTCTTCTGCGGCAAGGAATGAAAGATAAAACAAGCGATGGAGTGTATGACTGGAATGTTACGGGTGCCTCCATTTGTTATCTTGCTGTTGAGAGCGTTGTCTATTTTTTATTGACACTCGGGCTTGAAATTTTTCCTTCTCTCAAATTGACTCCGTTCATGATCAAAAAGTGGTGGGGGAAAATTAATATATTCCCACATAATTCTACTTATCTGGAACCTTTATTAGAACCTGCTGAAACTTTTGTTACGGACCTCAACGAAGACGTGGATGTGAAAACAGAAAGAAATAGAGTACTCTCAGGCTCCATTGATAATGCCATTATCTACTTGCGCAATCTTCGCAAGGTGTATTCTGAGGAGAAGAAACATGGGAAAAAGGTTGCAGTAGATTCATTAACCTTCTCAGTTCAGGAAGGAGAATGTTTTGGCTTTTTAGGAACAAATGGAGCTGGAAAAACCACAACACTTTCTATGTTATGCGGGGAAGAATCTCCTTCTGACGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCCATCCCAAGGCTGCTCGTAAACATATTGGGTATTGTCCACAATTTGATGCTCTGTTGGAATTCTTAACTGTAAAAGAGCATCTTGAGCTCTATGCTAGAATAAAAAGTGTTCCAGACTACACAATAGACAATGTTGTTATGGAAAAGTTGGTAGAGTTTGACTTACTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGAAAACTATCTGTTGCAATTGCAATGATTGGAGATCCTCCTATTGTCATTCTTGATGAACCATCCACAGGAATGGATCCCATTGCCAAAAGGTTCATGTGGGATGTAATATCTAGAATCTCAACTAGACGAGGAAAGACTGCAGTTATTCTTACTACCCATAGCATGAATGAAGCTCAAGCCTTGTGTACCAGAATAGGGATTATGGTTGGTGGACAACTAAGATGTATTGGAAGTCCGCAGCATCTAAAGACAAGATTTGGCAATCATTTAGAACTAGAGGTAAAACCCACTGAAGTGAGTTCTGTTGACTTGCAAACACTCTGCCAAGCTATTCAGGAAGTACTTTTTGATGTCCCTTCTCAACCTAGAAGCTTACTCAATGACCTTGAAATTTGCATTGGGGGTGCTGATTCCATCACCTCAGGAAATACCTCCATTGCAGAGATTAGCTTGACACCAGATATGATAGGCTTAATTGGAAGATGGCTTGGCAACGAAGAAAGAGTGAAGACTCTAATGTGCTGTACACCTGTCTATGACGGGGCCTCTCAGGAGCAGTTATCCGAACAATTATTTCGAGATGGTGGTATTCCATTGCCAGTGTTTTCTGAGTGGTGGCTGTCCAAACAAAAATTCTCAGAAATTGATTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGCCAAGGATACAATGGTTTAAGCATCAGATACCAGTTACCTTATGACGAGGACTTTTCCCTAGCAGATGTTTTTGGACTTCTTGAAGCAAATAGAGATAGGTTAGGGATTGCAGAGTACAGCCTCAGCCAATCAACTCTGGAGACAATATTTAATCATTTTGCAGCTAATGCGTGA 5676 0.3943 MGTASRQFKIMLKKNCLLKIRHPFVTATEILLPAIVLLLLAAVRMGVDTQIHPDQSHIQKDMFVEVGKGISPNFQQVLESLLDKREYLAFAPDTDETRMMIDVLSIKFPILKLVSIVYKDELELETYIRSDAYGICKDVRNCSNPKIKGAVVFYEQGPQSFDYSIRLNHTWAFSGFPDITTIMDTNGPFLNDLELEVSAVPTMQYSFSGFLTLQQVVDSYILFIAQQPELNSNAETVKLPLLGFNDTDFSLKVPWTQFNPTNIRIAPFPTREYTDDQFQAIVKKVMGILYLLGFLYPVSRLISYSVFEKEQKIKEALYMMGLKDGIFHLSWFVTYALQFAISSAVITACTMDNIFKYSDKTLVFAYFFIFGLSAIMLSFLISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDEGVSMILKVLASLLSPTAFALGSVNFADYERAHVGLRWSNIWRESSGVNFLACLLMMILDTLLYCAIGLYFDKVLPREHGMQYPWNFIFKKDFGRKKKIEENCSSSFKVKVTGNSSEPERNLFGQDTTNPAIEAISLDMKQQELDGRCIQIRNLHKVYDTKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALIFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFAILKGVEEDTLENVIINMADEVGLADKINTVVSSLSGGMKRKLSLGIALVGNSKVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRYIPTATCISEVGTEISFRLPMASSSTFERMFREIEGCMKKPLLSMEISDSCEKDSHGIESYGISVTTLEEVFLRVAGCDYDEVECSEETNRSLISEPVVSLASDDCPSTKICYYKVFGNYKKVIGFMSTMVGRACDLIFAAVISFINFIGMQCCSCCLITRSTFWQHSKALFIKRAISARRDHKTIMFQLIIPAIFLFIGLLFMELKPHPDQISLTLSTSNFNPLLSGGGGGGPIPFNLSFPIAEKVAQNVKGGWIQSCNPSSYKFPNSEKALTDAMEAAGPTLGPALLSMSEYLMSSFNESYQSRYGAIVMDDQNTDGSLGYTVLHNFSCQHAAPTFINLMNSAILRLATHDMNATIQTRNYPLPMTQSQHLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSVLSYWVSIFIWDFVSFLFPASFAIVLFYIFGLDQFVGGVSLVPTIIMLLEYGLSIASSTYCLTFFFFDHTVAQNVVLLVHFFSGLILMVISFVMGLFPSTISANSFLKNFFRISPGFCFADGLASLALLRQGMKDKTSDGVYDWNVTGASICYLAVESVVYFLLTLGLEIFPSLKLTPFMIKKWWGKINIFPHNSTYLEPLLEPAETFVTDLNEDVDVKTERNRVLSGSIDNAIIYLRNLRKVYSEEKKHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTLSMLCGEESPSDGTAFIFGKDICSHPKAARKHIGYCPQFDALLEFLTVKEHLELYARIKSVPDYTIDNVVMEKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLQTLCQAIQEVLFDVPSQPRSLLNDLEICIGGADSITSGNTSIAEISLTPDMIGLIGRWLGNEERVKTLMCCTPVYDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGYNGLSIRYQLPYDEDFSLADVFGLLEANRDRLGIAEYSLSQSTLETIFNHFAANA 1891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04373 1891 ProSitePatterns ABC transporters family signature. 695 709 IPR017871 GO:0005524|GO:0016887
Vivi6g04373 1891 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 988 1399 IPR026082 GO:0016020|GO:0055085|GO:0140359
Vivi6g04373 1891 CDD ABC_subfamily_A 1463 1689 - -
Vivi6g04373 1891 Gene3D - 547 796 IPR027417 -
Vivi6g04373 1891 Gene3D - 1455 1705 IPR027417 -
Vivi6g04373 1891 CDD ABC_subfamily_A 560 781 - -
Vivi6g04373 1891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 557 798 IPR027417 -
Vivi6g04373 1891 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1463 1701 IPR003439 GO:0005524
Vivi6g04373 1891 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 560 793 IPR003439 GO:0005524
Vivi6g04373 1891 Pfam ABC transporter 580 723 IPR003439 GO:0005524
Vivi6g04373 1891 FunFam ABC transporter A family member 1 1452 1706 - -
Vivi6g04373 1891 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1462 1692 IPR027417 -
Vivi6g04373 1891 Pfam ABC transporter 1485 1627 IPR003439 GO:0005524
Vivi6g04373 1891 SMART AAA_5 1493 1679 IPR003593 GO:0016887
Vivi6g04373 1891 SMART AAA_5 588 770 IPR003593 GO:0016887
Vivi6g04373 1891 FunFam ATP-binding cassette sub-family A member 12 552 797 - -
Vivi6g04373 1891 ProSitePatterns ABC transporters family signature. 1600 1614 IPR017871 GO:0005524|GO:0016887
Vivi6g04373 1891 Pfam ABC-2 family transporter protein 241 481 IPR013525 GO:0016020|GO:0140359
Vivi6g04373 1891 Pfam ABC-2 family transporter protein 992 1394 IPR013525 GO:0016020|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04373 Vivi-Chr6 144101927 144134012 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04373 560 796 Calmodulin-binding Proteins AT2G36910 25.101 2.83e-16 83.6