Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04371 ATGGTGATGATATGGGAAGATCTAACAGTAACGATTGGTGTAGGCAAGAAAAAGAAGTTGCTTGATGGTGTCACTGCTTTTGCTCAACCTGGTAGGATCATGGCTGTTATGGGTCCTTCTGGCAGTGGCAAAACCACCTTACTCACTTCTTTGGCAGGAACACTTGCCGCTAATGTTGCAATGTCTGGGAAGATTGAAATCAATGGGATGAAAAGAAGTTTGTACTCCAAAGAAGTGTCTTATGTTGGTCAAGAGGAACTTCTTTTGGGAACATTGAGTGTGAGAGAAACCCTCACATACTCAGCAAACATGAGACTTCCTTCTATAATGACCAAACAAGAGATAAACAAATTGGTGGAAGAAACAATAATAGAAATGGGACTTGAAGACTGTGCTAATACTAAGATTGGAAATTGGCATCTAAGAGGAATAAGTAATGGTGAAAAGAAAAGACTTAGCATTGGTCTTGAGATTTTGACACAACCTTATGTGTTACTTCTTGATGAACCAACTAGTGGACTTGATAGTGCCTCAGCTTTCTATGTCATTCAAGCACTAAGCAACATAGCTTTTAAAGGAAAGATAGTTATTTGTTCCATTCATCAACCAGGGTGTGAAATTTTTAATATTTTTGATGATTTGCTTTTGCTATCAAATGGAGAAACTGTTTATTTTGGAGAAGCAAACATGGCTCTAAAGTTTTTTGGTGATGCAGGTTTTCCTTGTCCCACCAAAAGAAATCCTTCTGATCATTTCATTATGAGCATTAATTTGGATTTTGACTTGATTAATGAAGCTCTTGCAAGATGCCATACAGCATCAAATTCCAAAGTGGGAATTATAAGAACCGCAGACATTAGAAGAAAACTCATAGAGAGTTACAAAAGTTCAGAGCTAACCATCAATACAAGAACAACCATTCAACAACTAAAAGCCAATGTGAAGAAAGAGGAAGCAATAAATTCCAATAATGTAACAAGCAGTGCCAACTGGATGAAGCAACTCTCCACACTCACCAAACGTTCTTTCCTCAACATGAGTAGAGACTTAGGCTACTATTGGCTCAGGATATTATTCTACATACTTATTGGAATTACTATTGGCACCCTCTTTTTTCATATTGGGACAGGCAATTCCTCCATCTTAGCTAGAGGAAAATGTGTATCATTCATTTACGGTTTCATGATATGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAATTAAAGGTTTTCTATGGTGAAAGATCGAAAGGACATTGTGGAGAGGCTGCATTTGTGATATCAAATATTATATCATCGTTTCCTTTCATCTTTCTAATATCAATCTCTTCTGGAATAATAATATACTTCATGGTGCAATTTCATCCTGGTTTAAGTAATTGTGCATTTTTCTGCATCAACTTGTTCTGCTGCCTATCTGTTGTTGAGAGCTGCATCATGGTTGTAGCAGCAGTGGTCCCTAATGTCATGATGGGTCTAGCCACAGGAACCGGTTTTATAATTTTCATGATGATGCCCTCTGAAATATTTAGACCACTAAATGACCTACCAAAGTTCTTTTGGCGCTATCCTATGTCCTACCTGAGTTTCGCTGCTTGGGCAGTTCAGGGACAGTACAAGAATGACATGTTAGGGGTTGAGTTTGATCCTCTACTACCTGGAGACCCAAAAGTTACTGGAGAACAAGTATTGCCAATACTATTTGGGGTTCCACTAAACCATGGAAAATGGTTGGACCTAGCAATGTTGATTATCTTATTATTTGTACATAGATTTCTTCTTTTCTTGGTGATTCGGTTTAACAAAAGAGGTGTATCACATGTGCTATGGTTTTATGTGATGGAAAATCTACTACTTGCAAAACAAGGTTTATTGAAGAATAAGGCACCTAAGAAACAAGAACTGCCACGTCCATTATCATCTCTAGAGAATGCTATGTCACCAGAATATGCTATAGTAAGACTTTGA 1974 0.3754 MVMIWEDLTVTIGVGKKKKLLDGVTAFAQPGRIMAVMGPSGSGKTTLLTSLAGTLAANVAMSGKIEINGMKRSLYSKEVSYVGQEELLLGTLSVRETLTYSANMRLPSIMTKQEINKLVEETIIEMGLEDCANTKIGNWHLRGISNGEKKRLSIGLEILTQPYVLLLDEPTSGLDSASAFYVIQALSNIAFKGKIVICSIHQPGCEIFNIFDDLLLLSNGETVYFGEANMALKFFGDAGFPCPTKRNPSDHFIMSINLDFDLINEALARCHTASNSKVGIIRTADIRRKLIESYKSSELTINTRTTIQQLKANVKKEEAINSNNVTSSANWMKQLSTLTKRSFLNMSRDLGYYWLRILFYILIGITIGTLFFHIGTGNSSILARGKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHCGEAAFVISNIISSFPFIFLISISSGIIIYFMVQFHPGLSNCAFFCINLFCCLSVVESCIMVVAAVVPNVMMGLATGTGFIIFMMMPSEIFRPLNDLPKFFWRYPMSYLSFAAWAVQGQYKNDMLGVEFDPLLPGDPKVTGEQVLPILFGVPLNHGKWLDLAMLIILLFVHRFLLFLVIRFNKRGVSHVLWFYVMENLLLAKQGLLKNKAPKKQELPRPLSSLENAMSPEYAIVRL 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04371 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 5 236 IPR027417 -
Vivi6g04371 657 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 244 IPR003439 GO:0005524
Vivi6g04371 657 SMART AAA_5 30 221 IPR003593 GO:0016887
Vivi6g04371 657 Gene3D - 2 234 IPR027417 -
Vivi6g04371 657 Pfam ABC-2 type transporter 334 539 IPR013525 GO:0016020|GO:0140359
Vivi6g04371 657 Pfam ABC transporter 22 172 IPR003439 GO:0005524
Vivi6g04371 657 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 2 609 - -
Vivi6g04371 657 Pfam ABC-2 type transporter 201 253 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04371 Vivi-Chr6 144063486 144067134 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04371 28 220 Calmodulin-binding Proteins AT2G36910 25.962 1.59e-09 59.3