Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04367 ATGGCAGAATCATTTCTTTTCGATATTGCTAATTCACTCCTAGGGAAGCTTGCTTCTTATGCTTATCAAGAAGCTTCTCGAGCCTGTGGTGTGTATAAAGATCTTCAAAAGTTCAAAGACACTTTGTCAATTGTCAAAGGTCTTCTGTTGGATGCTGAGTATAAGAAGGACCAAAAGCATGGGCTGCGTGAATGGATGAGACAGATTCAAAACATCTGCTCTGATGCTGAAGATGTCTTTGATGGATTTGAGTTCCAACACAAGAGGAAACAAGTTGTCCGAGTTTCTAACAGCACTCGGACGAAGGTATGTCACTTCCTTTCTTCCTCTAATCCAATTGTTTTACATCATAGGATGGCACGCCAAATCAAAGAGATTAGGGAAAGATTGGATAAGGTAGCAGCTGATGGGAACAAGTTTGGCCTTGCGAGAATCGATGTTGGTCCTGAACCTATTTTTCAAAGGAGAGAATTGACTCATTCCCATGTTGATGCTTCAAGTGTAATTGGAAGGGAGAGTGATAAGGAAGAAATTATCAAGCTTTTGATGCAACCACGTCCTCATGGTGAAGGTGATAAAAGTTTGTGTATTATTCCCATAGTGGGTATTGGAGGCTTGGGAAAGACTACGCTCGCAAAGTTGGTATTTAATGATAAGAGGATGGGTGAACTTTTTCAGTTGAAGATGTGGGCTTGTATCTCTGATGATTTTGACATCAGGCAAATAATTATAAAAATTATAAACTCTGTTTTTGCTTTTGGTCCACAAAGTATTGCTCACCAAGAAAACATCAGCAACTTAGATACTGAACAACTTCTAAGTCGTCTTAGACATAAGCTTTCTGGTCAGAAGTTTTTGCTCGTGCTAGATGATATTTGGAATGATGATCGTGCAAAGTGGATTGAGTTGATAGATTTGATAAACATTGGTGCAGCAGGAAGTCAAATCATAGTGACGACACGTAGTAAATCAATTGCTAAAATGACAGGTACTCTTCCCCCGTATGTTTTAAGCGGTCTTTCTCAAGATGATTGTTTATCCTTGTTTGTCAAATGGGCATTTAAGGAAGGTGAAGAAATTAAATATCCAGGTCTTGTTGAGATTGGAAAAGAAATCGTGAAAAAATGTGCAGGGGTTCCACTTGCTGTCAGAACATTAGGCAGCTCATTGTTCTCAAAATATGATTCCAAAAAGTGGATATCTCTGAGAGATTGTGAGATATGGAACTTTGAACAAAAGAAAGATGATATTTTGCCTGCACTAAAGTTAAGCTACGATCAAATGCCATCCTATTTGAGGCAATGTTTTGCTTACTTTTCCCTTTATCCCAAAGATCATGTCATCTTTGTTGATGATATTACCCGTATTTGGATAGCACTTGGATTAGTACAATCTCAAAATGGAAGTGAGAAACTAATGGATATTGCAAGAGAATATATAGAAGAGTTAAATTCTAGATCATTTCTTCAAGATTTCAAACAACTTGGCTACCTCGCATTCAAAGTGCATGATTTGATTCATGATCTTGCTATCTATGTTGCGAAAGAAGAGTGTGTAGCAGTTGACTCACATACTAGGAATATACCTCACCATGTAAGACACTTATCAGTTGTTGAAAATAATTCTACAGATAAAGCTTTGTTATCCAACTCAAGAAGTTTGAGAACTATATTATTTCCGGTCAAAGGGGTGAGCTTCGACAGCGAAACTTTGTTGGATACATGGATATCAAAATACAAATACTTACGGTATTTAGATTTAAATTGTTTTTCCTTTGAGACGCTGCCTTGTTCAATTGCTAAACTGGAGCACTTGCGAGTTCTTGACTTTTCATATAATACGAATATCAAAAGACTTCCCCATTCAATTTGCAAACTCCATAATTTGCATGTCTTGAAACTCATGGGATGCACAGGGCTTGAAACATTGCCTCAAGGGTTAGACTGGTTGATTAGCCTTCGAGAATTGTATATAACCACAAAGCAATCAGTTGTGTCACTCACAGAACTTGCAAACTTGAATGATCTTCAAGTTTTATACTTTTATAAGTGTGACAATATGAAGTTTCTATTCAGTGAGGCACAACAATTCACTTTCCTTGAAAGATTGATTGTTAGATCATGTGGTAGCCTAGAGTCCTTACCTCTCTTCATTTTTCCTAAATTACAATATCTTGCAATTTCAGACTGCCAGTGGATAAACTTGTCGTTGTACAACGAAAGCCCAATCCCAAAATTGATGATGATGAAACATTTATATATTGGAATACTTGCAGGACTTCTGACAATTCCTAGCTGGATTGAAGGCGTTGTAGAGACTTTAGAGACCTTATACATTTTTGACCTTCCCGATCTTACAACACTTCCCGAGTGTCTAACAACAATGACTCGTCTTAAGAGACTTTGGATTTCTCGCTGCCCTCAACTGTTGAGTCTTCCTAGTGACTTCCATCACCTCACTTCCCTTGAAAATCTATTCATATATGGTTGTCCTAAGCTGTTCCAAAAATATCAACCTGAGTCCGGTGAGCATTGGCCCATGATTGTTGGCATGAAAATCACTTCAGTTACAATTGAAAAAGGAACGATGAAGGAATGA 2598 0.3776 MAESFLFDIANSLLGKLASYAYQEASRACGVYKDLQKFKDTLSIVKGLLLDAEYKKDQKHGLREWMRQIQNICSDAEDVFDGFEFQHKRKQVVRVSNSTRTKVCHFLSSSNPIVLHHRMARQIKEIRERLDKVAADGNKFGLARIDVGPEPIFQRRELTHSHVDASSVIGRESDKEEIIKLLMQPRPHGEGDKSLCIIPIVGIGGLGKTTLAKLVFNDKRMGELFQLKMWACISDDFDIRQIIIKIINSVFAFGPQSIAHQENISNLDTEQLLSRLRHKLSGQKFLLVLDDIWNDDRAKWIELIDLINIGAAGSQIIVTTRSKSIAKMTGTLPPYVLSGLSQDDCLSLFVKWAFKEGEEIKYPGLVEIGKEIVKKCAGVPLAVRTLGSSLFSKYDSKKWISLRDCEIWNFEQKKDDILPALKLSYDQMPSYLRQCFAYFSLYPKDHVIFVDDITRIWIALGLVQSQNGSEKLMDIAREYIEELNSRSFLQDFKQLGYLAFKVHDLIHDLAIYVAKEECVAVDSHTRNIPHHVRHLSVVENNSTDKALLSNSRSLRTILFPVKGVSFDSETLLDTWISKYKYLRYLDLNCFSFETLPCSIAKLEHLRVLDFSYNTNIKRLPHSICKLHNLHVLKLMGCTGLETLPQGLDWLISLRELYITTKQSVVSLTELANLNDLQVLYFYKCDNMKFLFSEAQQFTFLERLIVRSCGSLESLPLFIFPKLQYLAISDCQWINLSLYNESPIPKLMMMKHLYIGILAGLLTIPSWIEGVVETLETLYIFDLPDLTTLPECLTTMTRLKRLWISRCPQLLSLPSDFHHLTSLENLFIYGCPKLFQKYQPESGEHWPMIVGMKITSVTIEKGTMKE 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04367 865 Gene3D - 10 126 - -
Vivi6g04367 865 CDD RX-CC_like 2 134 IPR038005 -
Vivi6g04367 865 PANTHER DISEASE RESISTANCE PROTEIN RP 49 826 IPR044974 GO:0006952
Vivi6g04367 865 SUPERFAMILY L domain-like 501 836 - -
Vivi6g04367 865 Gene3D - 339 423 IPR042197 -
Vivi6g04367 865 Pfam NB-ARC domain 172 426 IPR002182 GO:0043531
Vivi6g04367 865 Pfam Rx N-terminal domain 11 98 IPR041118 -
Vivi6g04367 865 PRINTS Disease resistance protein signature 376 390 - -
Vivi6g04367 865 PRINTS Disease resistance protein signature 600 616 - -
Vivi6g04367 865 PRINTS Disease resistance protein signature 279 293 - -
Vivi6g04367 865 PRINTS Disease resistance protein signature 197 212 - -
Vivi6g04367 865 Gene3D Ribonuclease Inhibitor 517 853 IPR032675 -
Vivi6g04367 865 Gene3D - 424 512 IPR036388 -
Vivi6g04367 865 Gene3D - 153 331 IPR027417 -
Vivi6g04367 865 FunFam Probable disease resistance protein At1g63360 425 512 - -
Vivi6g04367 865 Pfam Leucine rich repeat 581 637 IPR001611 GO:0005515
Vivi6g04367 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04367 Vivi-Chr6 143983616 143986969 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04367 198 833 WRKY Transcription Factor Family AT5G45050 22.892 2.66e-13 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04367 - - psat:127118588 1283.47