Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04366 ATGGCTGAAACATTTTTGTTTGATGTTGCTGGTTCACTATTAGGGCAGCTTGCTTCTTTTGCTTTTGAAGAGTTTGCCCGTGCCTGTTACGTGTATGATGATCTTCAAGAGATCAAAGATACTCTGTCAATTATCAGAGGTCTTTTGTTGGATGCGGAGGAGAAGAAAAACCAACGACATGCTTTGCGTGAATGGCTAAGGCAGATTCAACACATTTGCTCTGATGCTGATGATGTTTTGGACGAATTTGGTTTGCAAGTCACGCTAAAACAAGCTGTTGAAGATTCTGGCAGCACAAGGAGTAAGGTACGCCGCTATGTTTCTTCCTCTAATCCACTTGCTTTCCGTTTTAGGATGGCACATCAAATTAGAGATATTAGAGGCAGATTGAATAAGGCTGCAACCGATGGAGCCGGGTTTGCACTTGTGAAAATCGATGTTGAGCCCGGACTTGGTGTGCAAAGTAGAGAAAAGACTCATTCATATGTTGATATTTCAAGTGTAATTGGGAGGGAGAAAGATAAGGAAGCAATTATCAAGCTCTTGAAGCCACCTCATCCTCACACTGATAAAGGCCTATGTGTTATTCCCATTGTGGGTATTGGAGGCATGGGAAAGACCACACTTGCAAAATTCTTGTTCAATGATCAGAGTATCGATCAACTTTTCCAATTAAAGATGTGGGTGAGTGTCTCTGAATATTTTGACCTCAGGAAGATTGTTATTAAAGTCATCAACTCAGCTTCTGCTGCTTCTGCTTTCGATTCAGCTTCAAGTGTTGCTCACCAGGAGAATATAGACAATTTTGATATTGAGCGGCTACAAATTCATTTGAGGCGAAAACTTTCTGGTAAAAAGTTTTTACTTGTGTTAGATGATATATGGAATGGTGATCTTGTAAAATGGACTGAGTTGAAAGATTTGTTACAAGTTGGTACATCTGGAAGTAAAATCATGGTGACAACACGAAACAAATCAGTTGCTTCGATAATGGGTACCGTTCCCTCCTATGTTTTAGAAGGTCTTGATACAGAGAAATGTTTATCTCTGTTTGTCAAATGGGCTTTCAAGGAAGGAGAAAAAAAAAAGTATCCAAATCTAGTGGAGATCGGAAAAGAACTGGTGAAAAAATGTGCAGGGGTTCCACTAGCCGTGAGAACATTAGGAAGTTCTTTATTTTTAAACTATGATTTGCACAAGTGGGAATATGTAAGAGACCATGGGTCATGGAATTCAGAAATGAAGAACGGTGATATCCTACCAGCATTACAATTAAGCTATGATCAAATGCCATCTTATTTGAAGCAATGTTTTGCTTTTCTTTCCCTTTATCCCAAAGATTTTACCTTCGATAGTGATGAAATTATAAATCTTTTTGCAGCCCTTGGGTTAGTTCAAACCCAAAATGGAAGTGAAAAGATAGATAGTATTGTAAGAGAATATATAGACGAGTTAAATTCACGATCATTTCTTGAGGATTTCAGAGACTATGGCTACTATTACAAGTTCAAAGTACATGATTTGATACATGATCTTGCAATATGTGTCGCTAGAGAGGACTTTGTATTGGTAAACTCTGATACACAAAATATACCAGAGAAAGCAAGGCATTTATCAATTTTAGGAAATGTTTTACTTGACTATACTTTGATTCCTAAGTCCAAAAGAGTAAGAACTATATTATATCCTGTTCAAGGAGTGGGTCTTAAAAGTAAAAGTCTTTTGCATACATGGATATTAAGATACACATACGTACTATACTTAGATTTAAGTAGTTCTTCATTTCAGACTCTGCCAACCTCGATTGCCAAATTGAAGCACCTGTGTGTTCTCTATATTCGAGATAACCACCAAATCAAAACACTTCCCCGCTCTATTTTCAAACTCCAATGTTTGCAAGTTTTGTCCCTTGTTGGATGCACGGAACTTGAAACATTGCCTGAAGGATTCGAGAAGTTGACAAGCCTCCGAAAGCTGTATATAACCACAAAACAGCTTTCTCTGTCACTGGATGAATTCGCAAGCTTGAAACATCTTCAAGCTTTGGGTTTATATAATTGTGACAATATGAAGCTTTTGGTCAGCGGGACACAAACACCACTCACTTCCCTTGAAGCATTGTGCATTCAATCTTGTAAGAGCTTGGAGTCTTTCCCTCTAAGTATTTTCCCGAAATTGCAAACTCTGGTAATTAAAGATTGTCCGATGTTCAACCTGTCGTTGAACTATGAGATTGAAGGCCCAATCCAGAGGCAGAGATTGAGGTTGAAACATCTGCACCTTAAGAGTTTTCCAAAACTTTTGAAATTGCCAAGATGGATTGAAGATGCAGCAGAGACTTTACAAACCTTGAAAATTCGAAACTTTCCAAATCTCAAGATGCTTCCTGAGTGTCCAACATTAATGACTCATCTCAAAAGCCTATATATTGAATCATGTCCCCAACTTTTGAGCCTTCCAAGTGACATGCATCGTCTCATTGCACTTGAAGAACTTCGCATTTATCGTTGTCCTGAGTTGTGCCAAAAATGTCGGCCCCCATCTGGTGAGTACTGGCCCATGATTGGCCACATCAAGCGAATTTCCATAGGAAAACATTAA 2601 0.3864 MAETFLFDVAGSLLGQLASFAFEEFARACYVYDDLQEIKDTLSIIRGLLLDAEEKKNQRHALREWLRQIQHICSDADDVLDEFGLQVTLKQAVEDSGSTRSKVRRYVSSSNPLAFRFRMAHQIRDIRGRLNKAATDGAGFALVKIDVEPGLGVQSREKTHSYVDISSVIGREKDKEAIIKLLKPPHPHTDKGLCVIPIVGIGGMGKTTLAKFLFNDQSIDQLFQLKMWVSVSEYFDLRKIVIKVINSASAASAFDSASSVAHQENIDNFDIERLQIHLRRKLSGKKFLLVLDDIWNGDLVKWTELKDLLQVGTSGSKIMVTTRNKSVASIMGTVPSYVLEGLDTEKCLSLFVKWAFKEGEKKKYPNLVEIGKELVKKCAGVPLAVRTLGSSLFLNYDLHKWEYVRDHGSWNSEMKNGDILPALQLSYDQMPSYLKQCFAFLSLYPKDFTFDSDEIINLFAALGLVQTQNGSEKIDSIVREYIDELNSRSFLEDFRDYGYYYKFKVHDLIHDLAICVAREDFVLVNSDTQNIPEKARHLSILGNVLLDYTLIPKSKRVRTILYPVQGVGLKSKSLLHTWILRYTYVLYLDLSSSSFQTLPTSIAKLKHLCVLYIRDNHQIKTLPRSIFKLQCLQVLSLVGCTELETLPEGFEKLTSLRKLYITTKQLSLSLDEFASLKHLQALGLYNCDNMKLLVSGTQTPLTSLEALCIQSCKSLESFPLSIFPKLQTLVIKDCPMFNLSLNYEIEGPIQRQRLRLKHLHLKSFPKLLKLPRWIEDAAETLQTLKIRNFPNLKMLPECPTLMTHLKSLYIESCPQLLSLPSDMHRLIALEELRIYRCPELCQKCRPPSGEYWPMIGHIKRISIGKH 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04366 866 Gene3D - 10 124 - -
Vivi6g04366 866 Gene3D - 341 425 IPR042197 -
Vivi6g04366 866 PRINTS Disease resistance protein signature 195 210 - -
Vivi6g04366 866 PRINTS Disease resistance protein signature 674 690 - -
Vivi6g04366 866 PRINTS Disease resistance protein signature 378 392 - -
Vivi6g04366 866 PRINTS Disease resistance protein signature 281 295 - -
Vivi6g04366 866 FunFam Probable disease resistance protein At1g61300 153 335 - -
Vivi6g04366 866 Pfam Rx N-terminal domain 10 97 IPR041118 -
Vivi6g04366 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 441 IPR027417 -
Vivi6g04366 866 CDD RX-CC_like 12 130 IPR038005 -
Vivi6g04366 866 Gene3D - 426 515 IPR036388 -
Vivi6g04366 866 Gene3D Ribonuclease Inhibitor 524 852 IPR032675 -
Vivi6g04366 866 Gene3D - 154 336 IPR027417 -
Vivi6g04366 866 PANTHER DISEASE RESISTANCE PROTEIN RP 35 837 IPR044974 GO:0006952
Vivi6g04366 866 Pfam NB-ARC domain 172 428 IPR002182 GO:0043531
Vivi6g04366 866 SUPERFAMILY L domain-like 504 846 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04366 Vivi-Chr6 143979338 143982845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04366 585 679 WRKY Transcription Factor Family AT4G12020 32.653 3.82e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04366 - - gmx:100812584 1022.31