Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04363 ATGATCATGATGGAGAATTCCTCAATAAGTGGAGTTCATGATTTCAATATGGCTTCAAGAAAAGCTGGAGAAGCAGCTTTGAGACGCTATGAGGCGACGCAGTGGCTAGAAAGTCAAGTTGGTCCTCTTGGAATATCTAAGCAACCCTCGGAGAGGGAACTTGTTTCTTGCTTGAGAAATGGTCTAATTCTTTGCAAGGCTATTAACAAGATTCATCCCGGAGCAGTACCGAAGATAGTAGATACTCAAGTACCAATGCAATCACTTGCCTGGGATTCTCAGCCTTTGCCTGCCTATCAGTATTTTGAAAATGTTCGCAACTTTATTAATGCTGCCGGAGAATTAAAGCTTCCAGCTTTTGAGGCTTCTGATCTCGAAAAGGAGAGTGTAGAGAATGGATCTGCTGGAAAAATTGTTGATTGCATTCTATCACTGAAATGGTTTCATGAGTCCAAGCAGATGAACAACCAGAGTGGACCCAGCAAACGCCTGAAATCTCCTTTAGTTATGCAATCAATTAATAGAATGCAACAAAGAGCCACAACTGCATTACCCTCTGATGCATGCAGGCGCTTGGATTTGTCTGCAACATCTGAAAATAAGCCTCCTGCTGAGAATAATTTTCAAACACGAGAAGAAAATATGGAATCACTTGTCAAGATACTAGTTGACCGAATGCTTGATGCCAAAGAAAATGTCGATGGAAAGCTTGTTGCTTCTATTTGTAATGGAGACCTGGATCCAATAAACCTATTTAATCAGGTTTTGATTAATTGTTGTGGGGAACAGCCATCTACGAAATTCCCTGAGTTGCCATTGCTACTAAAGAATTTTATTAAAGAAGGGAATAGCTTACCAACTCATCTCACTACCAAAAGCACAGAGTCAGATGCTTTCTCTGCACCTAAAAGTTTAAAGTGTTCCAGAGCTTGCCTTGGAAAGTGCACATGCAATCACAGGCTTCTCATAGACATACAAAAAAAAGAACTTCAGGATCTTAAGGCTTTGAAGTTGAGAATTAAGAGTGAGTTTGAAGAGATGCAATCACAGGTTCAGAGGTTTTTCAATGATATAGGAAGTCAAGTAAATGAGATGTCAGCCAAAGCTGTTGGGTATCACAAAGCAGTGGAAGAGAACAGAAAATTATACAACATGGTACAAGATTTGAAAGGTAATATCAGAGTATATTGCAGAATCAGACCTGCGTTCAGGGCCGAATCCAAGAATGTGGTTGATTTCATTGGTGAAGACGGTTCTCTATTCATTTTAGATCCATCAAAAACATCAAAAGATGGAAGAAAATCTTTTCAGTTTAATCAGATTTTTGGTCCAACAGCTGGACAAGATGAGGTTTATAGAGACACTCAACCATTAATTAGATCTGTGATGGACGGTTACAATGTCTGTATTTTTGCTTATGGTCAAACTGGATCGGGGAAGACTCATACCATGAGTGGTCCTTCAGGTGGAACATCCAAGGATATGGGGATTAATTATCTGGCTCTTAATGATTTATTTCATATGTCTAATGAAAGGGAGGGTACCATAAAGTATGACATTTATGTCCAAATGGTTGAGATTTACAATGAACAAGTCAGAGACCTACTTGCAGAAGACAAAACAGAAAACAAATTAGAGATCCGGAGCTGCAGCGAAGATGGTTTAAGCCTTCCAGATGCTAGATTGCGGTCTGTGAAGTCTACTACCGATGTTATGATCCTTATGAAACTTGGCGAGGTTAACCGTGCTGTCAGTTCTACTGCAATCAATAATAGGAGTAGTCGCTCCCACAGTGTACTTACTGTTCATATTAATGGCAAAGATACAACTGGAAACTCCATTCGCAGTTGCCTTCATTTAGTAGATCTTGCCGGAAGTGAAAGAGTGGACAAGTCTGAAGTCACAGGAGATAGACTAAAGGAGGCACAATATATTAACAAGTCTCTTTCTTGTTTGGGAGATGTGATCACCGCACTGGCTCAAAAGAATTCTCACATTCCTTACCGGAACAGCAAACTCACACTTCTTTTGCAGGATTCCTTAGGCGGACATGCTAAAACTTTGATGTTTGCGCATGTGAGTCCCGAAGCAGATTCCTTTGGTGAAACAGTGAGTACTCTAAAGTTTGCTCAGAGGGTTTCCACTGTGGAACTTGGGGCAGCTCGAATAAATAAAGAAAGCAGCGAGGTTATGCAACTCAAAGCACAGGTTGAGAACCTTAAGACTCAATTGGCCAACAAGGAAAATTCTAAACCGATGTTCAATAGAACTAAAGAACCTCGGACTCCATTAGAAAAAACTCCACTGCGACCTCGAAGACTTAGTATTGAAAATAAAAGTGGAGCCAAGTCACCTTCTTACGTTGCTCGTTCAAGAAGACTAAGCTTGGAAGGTGCAAGAACTATAAAAAAGGCATCTGTTGATGTAAACAAAACTTTGCAATTTGACCTAATGTCTCAACAGAAATATCATCCACAGCAAGATCCAAAAGCAGCAGTGTCAAAGCTAAATGGCCAATTGAGCAATGAAAGTTCCATATCAGAGTTGCATGCTGAGGATAAAAGTGGAGCCAAGTCCTCTTCTTACATTCTCCGTTCAAGAAGACTAAGCTTGGAAGGTCCAAGAACTATAAAAAAAGCATCCGCTGATGTAAACAAAACCTTACCGTTTGACCAATTAAGCAACGAGAGTTCCACATCAGCGTTGCATGCTAAAGTTCCTCCAAGTCCTGCAAATATCTATCCGAAGAGTTTGATCGAAGTTGGTAGTGCGCTCCAAATCCACACTCCTAAACTACCTCAAACGCCCGAATCAACACTGCTAGATAAAAATGATTCAAACAGAGTGCCAGGTGACCTTGCTGATTCCATAACAGCAAAGGGAAAAGGGTCACAGTTTAGAAGATCCCTGAGAACAATTGGGAAACTGATTAGTGGCCCTGATAAAAGAAGCCAACAAACTACGGTTGAAGTGAAGTCACCTACCAAGGGAAGCATTCAAGAAAGTCAGATAAAGTCGCCAGTAGCAACTAGTGAGAGGACAAAAAGGAGGCAATCTTTAACAGGAATTCCATCCGGGCCTAACAATAGGCGAAGATCCTCTCTTGGAGGAGGGAAGCCAGATCCTGTAGCATATGAGAAGGATGAGAAGGAGAGAAATGCCAGAACGCCTCCTCCTGTTCGTTCAGAAAGCAAGACTGCAAAAAGGTGGCAATAG 3216 0.4108 MIMMENSSISGVHDFNMASRKAGEAALRRYEATQWLESQVGPLGISKQPSERELVSCLRNGLILCKAINKIHPGAVPKIVDTQVPMQSLAWDSQPLPAYQYFENVRNFINAAGELKLPAFEASDLEKESVENGSAGKIVDCILSLKWFHESKQMNNQSGPSKRLKSPLVMQSINRMQQRATTALPSDACRRLDLSATSENKPPAENNFQTREENMESLVKILVDRMLDAKENVDGKLVASICNGDLDPINLFNQVLINCCGEQPSTKFPELPLLLKNFIKEGNSLPTHLTTKSTESDAFSAPKSLKCSRACLGKCTCNHRLLIDIQKKELQDLKALKLRIKSEFEEMQSQVQRFFNDIGSQVNEMSAKAVGYHKAVEENRKLYNMVQDLKGNIRVYCRIRPAFRAESKNVVDFIGEDGSLFILDPSKTSKDGRKSFQFNQIFGPTAGQDEVYRDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTSKDMGINYLALNDLFHMSNEREGTIKYDIYVQMVEIYNEQVRDLLAEDKTENKLEIRSCSEDGLSLPDARLRSVKSTTDVMILMKLGEVNRAVSSTAINNRSSRSHSVLTVHINGKDTTGNSIRSCLHLVDLAGSERVDKSEVTGDRLKEAQYINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARINKESSEVMQLKAQVENLKTQLANKENSKPMFNRTKEPRTPLEKTPLRPRRLSIENKSGAKSPSYVARSRRLSLEGARTIKKASVDVNKTLQFDLMSQQKYHPQQDPKAAVSKLNGQLSNESSISELHAEDKSGAKSSSYILRSRRLSLEGPRTIKKASADVNKTLPFDQLSNESSTSALHAKVPPSPANIYPKSLIEVGSALQIHTPKLPQTPESTLLDKNDSNRVPGDLADSITAKGKGSQFRRSLRTIGKLISGPDKRSQQTTVEVKSPTKGSIQESQIKSPVATSERTKRRQSLTGIPSGPNNRRRSSLGGGKPDPVAYEKDEKERNARTPPPVRSESKTAKRWQ 1071
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04363 1071 MobiDBLite consensus disorder prediction 931 1071 - -
Vivi6g04363 1071 SMART ch_5 28 145 IPR001715 GO:0005515
Vivi6g04363 1071 Gene3D - 13 179 IPR036872 -
Vivi6g04363 1071 PRINTS Kinesin heavy chain signature 465 486 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04363 1071 PRINTS Kinesin heavy chain signature 617 635 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04363 1071 PRINTS Kinesin heavy chain signature 666 687 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04363 1071 PRINTS Kinesin heavy chain signature 587 604 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04363 1071 ProSiteProfiles Kinesin motor domain profile. 392 716 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04363 1071 ProSiteProfiles Calponin homology (CH) domain profile. 26 150 IPR001715 GO:0005515
Vivi6g04363 1071 Coils Coil 723 750 - -
Vivi6g04363 1071 FunFam Kinesin-like protein KIN-14L 14 177 - -
Vivi6g04363 1071 PANTHER KINESIN-LIKE PROTEIN KLP-3 33 980 IPR027640 GO:0003777|GO:0007018
Vivi6g04363 1071 SUPERFAMILY Calponin-homology domain, CH-domain 29 159 IPR036872 -
Vivi6g04363 1071 FunFam Kinesin-like protein KIN-14A 334 718 - -
Vivi6g04363 1071 SMART kinesin_4 390 724 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04363 1071 Coils Coil 323 350 - -
Vivi6g04363 1071 MobiDBLite consensus disorder prediction 931 945 - -
Vivi6g04363 1071 Pfam Kinesin motor domain 398 715 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Vivi6g04363 1071 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 392 750 IPR027417 -
Vivi6g04363 1071 MobiDBLite consensus disorder prediction 979 1032 - -
Vivi6g04363 1071 Pfam Calponin homology (CH) domain 28 149 IPR001715 GO:0005515
Vivi6g04363 1071 Gene3D Kinesin motor domain 334 719 IPR036961 -
Vivi6g04363 1071 MobiDBLite consensus disorder prediction 1042 1058 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04363 Vivi-Chr6 143949620 143957150 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04363 321 762 Calmodulin-binding Proteins AT5G65930 37.946 5.27e-72 259