Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04349 ATGGAAGACTTTGTCTATCACCACCACAACCACAACCTCAAACTCAAATACAAACGCAAGATCTGCTCTTTCCTGATTACCATGGCAGAATCATTTCTCTTCGATGTTGCCAATTCACTGCTTGGGAAGGTTGCTTCTTTTGCCTGTCAAGAAGCTTCTTTGGCCTATGGTGCGAAAGACGATCTAGAACGTTTCAGAGAATCTTTGTTAATCGTCAGAGGTTATCTACTGGATGCTGAGTCCAGGAAAGACCAAAGTCATGCTTTGCGGGAATGGCTAAGGCAGATTCAAAACATTTGCTTTGACGCTGAAGATATATTTGATATATTTGAGTTGCAAGACAAGAGGAAGCAAATTGTCAAATCCTCTGGAAGCATCACAAAGAAGGTAAGCCACTTGTTTTCTTCCTCTAATCCAATTGTATTCCTTCCTAGGATGGGACATCAAATCAAAGAGATTACCGACAAATTGGAGAAGAAAGCAGCCGAGGGGAAAACGTATGGGCTTACAACTAATCCCGAACTTGTTGTGCAAGAAAGAGAATTGACTTATCCTGACGTTAATGTTTCACGTGTAATTGGAAGGGATAATGATAAAGATGAAATTATCAAGCTTTTGATGCAACCTTTTCCTCAGGATGGAAATGATGGTGATAAAAGCATGTGTGTCATTCCCATTGTGGGAATGGGAGGATTAGGGAAGACCACACTTGCAAAGTTGGTGTTCAATGATGACACAATGGATCAGCTTTTCCAATTGAAGATGTGGGTGTGTGTCTCTCTTAATTTTGACATCAAGCAGATAATCATTAAAATCATCAACTCAGCCACTACTGCAGATTCTAAAGTAGCTTCAGCTCCATTCACTCCTCAAGAGAACATTGACAGCTTAGATATTGTGCAGCTAGTAAGTCGTTTAAAACAAAAACTTTCTGGTCAAAAGTTTCTACTTGTGTTAGATGACATATGGAACGAAGATCGTCAAAAGTGGATTGAGTTGGAAGATTTGATCAAAGTTGGCGCACCAGGAAGCAAAATAATGGTGACAACACGTAGTACATCTATTGCTTCCATGATGGGTAATGTTTCCTCATATGAATTAAAAGGTCTTTCTTCAGAGGAATGTTTATCTCTATTTGTCAAATGTGCATTCAAGGAAGGTGAAGAAAAAAGATATCTGAATCTAGTGGAGATCGCAAAAGAAATTGTGAAAAAATGTCACGGGGTTCCACTAGCCGTGAAAACATTAGGAAGTTCTCTCTTCTCAAACTTTGATATAAATAAGTGGGAATTTGTCAGAGACTCTGAAATATGGAATTTAGAACAAAAAAAAGATAGTATTTTACCAGCCATAAAAGTAAGTTATGATCAAATGCCATCCATTCTAAAACAATGTTTTGTTTATTTTTCCCTTTATCCCAAAGATTATATCTTTAATAGTCTTGCAATGTGTGATCTTTGGGTAGCCCTTGGATTGGTTCAATCCCGAAATGGAAGAGAAAAGCTAGAGCATGTTGCAGGAAAATATATTGATGAGTTACATTCAAGATCATTTATTCAGGATGTCGATGACTTTGGCTTCTTTTGCCTGTTCAAAGTACATCATTTGATACACGATCTTGCATTGTATGTTGCAGGAAACGAGTTTGTGGCGGTAAACTCACAAACTCGACATATACCTCAACAAGCAAGGCATTTATCATTTGTTGTTGAAGATAAGTCATTTGGCCATGCTTTGTTCCCAGAGTCTAGAAGTGTGAGAAGCATACAATTTCCCATCTCGGGAATGGGTCTTGAGAGTGAAAGTGTTCTGAATACATGGCTGTCAAAGTACAAATACTTGCGTTATTTAAATTTATGTAACTCTTCTTTTGAAACTGTGCCCAAATCAATTGCAAAATTGGAGCACCTGCGTTCTCTCGATCTTTCTGGTAATAACAAAATCAAAACACTACCAAATTCCATTTGCGAACTCCTAAATTTGCAAACTTTGATGTTTGGTGAATGCCCAGAGCTTGAAAAGTTGCCCAAAGGATTAGGAAAGTTGATTAACCTCCATACTCTATGTGTCGCTACAAAACAATCTACTCTACCATATTATGAATTCGCTAGCTTGAACAATCTTCAAACTTTGATTTTTCAGGATTGTGTCAATCTAAAATTTTTGTTCGAACAACCACTCCCTTCTGTTGAAAAACTGTATTGCATATCATGTGAGAGCCTGGAGCGCTTACCTCTCATTACTTTTCCTAAATTACAGACATTATGTATTAATGGTTGTCAGATGTTAAACTTGTCATTGGAGAATGAAAACTCAATCCAAAAGCTGAGGATGAAACATTTGTATCTCTCTGATTTTCCAAAGCATCTAACACTACCTCAATGGATTGTATGTGCCGTGGACACTTTAGAGATCTTTTATATAGAAAATTTTCCTAATCTTCAAATGCTTCCTGGGTATCTTACTACAATGACTCTTCTTAAGAGGATCTATATTGTTAGTTGTTCTCAACTGTTGAGTCTTCCAAGTGGTTGGGATCGGCTCACTGTACTTGAAGTTTTATTCATACATGATTGTCCTGAACTGTACCGAAAATGTCAGCCTCATTCTGGGGAGTACTGGCCCATGATTCGTCATATTAAAAACATTCGCATTCAAGAAGGAGAAAAGGAGGAGGAATGA 2682 0.3773 MEDFVYHHHNHNLKLKYKRKICSFLITMAESFLFDVANSLLGKVASFACQEASLAYGAKDDLERFRESLLIVRGYLLDAESRKDQSHALREWLRQIQNICFDAEDIFDIFELQDKRKQIVKSSGSITKKVSHLFSSSNPIVFLPRMGHQIKEITDKLEKKAAEGKTYGLTTNPELVVQERELTYPDVNVSRVIGRDNDKDEIIKLLMQPFPQDGNDGDKSMCVIPIVGMGGLGKTTLAKLVFNDDTMDQLFQLKMWVCVSLNFDIKQIIIKIINSATTADSKVASAPFTPQENIDSLDIVQLVSRLKQKLSGQKFLLVLDDIWNEDRQKWIELEDLIKVGAPGSKIMVTTRSTSIASMMGNVSSYELKGLSSEECLSLFVKCAFKEGEEKRYLNLVEIAKEIVKKCHGVPLAVKTLGSSLFSNFDINKWEFVRDSEIWNLEQKKDSILPAIKVSYDQMPSILKQCFVYFSLYPKDYIFNSLAMCDLWVALGLVQSRNGREKLEHVAGKYIDELHSRSFIQDVDDFGFFCLFKVHHLIHDLALYVAGNEFVAVNSQTRHIPQQARHLSFVVEDKSFGHALFPESRSVRSIQFPISGMGLESESVLNTWLSKYKYLRYLNLCNSSFETVPKSIAKLEHLRSLDLSGNNKIKTLPNSICELLNLQTLMFGECPELEKLPKGLGKLINLHTLCVATKQSTLPYYEFASLNNLQTLIFQDCVNLKFLFEQPLPSVEKLYCISCESLERLPLITFPKLQTLCINGCQMLNLSLENENSIQKLRMKHLYLSDFPKHLTLPQWIVCAVDTLEIFYIENFPNLQMLPGYLTTMTLLKRIYIVSCSQLLSLPSGWDRLTVLEVLFIHDCPELYRKCQPHSGEYWPMIRHIKNIRIQEGEKEEE 893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04349 893 Gene3D - 179 364 IPR027417 -
Vivi6g04349 893 Gene3D - 369 453 IPR042197 -
Vivi6g04349 893 FunFam Probable disease resistance protein At1g63360 455 543 - -
Vivi6g04349 893 Gene3D - 37 151 - -
Vivi6g04349 893 PANTHER DISEASE RESISTANCE PROTEIN RP 82 817 IPR044974 GO:0006952
Vivi6g04349 893 Pfam Leucine rich repeat 613 664 IPR001611 GO:0005515
Vivi6g04349 893 ProSiteProfiles Leucine-rich repeat profile. 636 658 IPR001611 GO:0005515
Vivi6g04349 893 Pfam NB-ARC domain 217 456 IPR002182 GO:0043531
Vivi6g04349 893 PRINTS Disease resistance protein signature 632 648 - -
Vivi6g04349 893 PRINTS Disease resistance protein signature 309 323 - -
Vivi6g04349 893 PRINTS Disease resistance protein signature 223 238 - -
Vivi6g04349 893 PRINTS Disease resistance protein signature 406 420 - -
Vivi6g04349 893 Pfam Rx N-terminal domain 38 124 IPR041118 -
Vivi6g04349 893 Gene3D - 454 542 IPR036388 -
Vivi6g04349 893 SUPERFAMILY L domain-like 522 875 - -
Vivi6g04349 893 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 176 468 IPR027417 -
Vivi6g04349 893 Gene3D Ribonuclease Inhibitor 554 884 IPR032675 -
Vivi6g04349 893 CDD RX-CC_like 29 159 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04349 Vivi-Chr6 143794288 143797980 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04349 224 862 WRKY Transcription Factor Family AT5G45050 22.886 3.42e-17 85.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04349 - - vvo:131611027 1288.09