Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04276 ATGACTATATCGTGTTGGAAACCAAGTGTGGAGCGTGATGATGGATTGCTATGGTATAAGGATTTGGGGAATCATCTTTATGGTGAGTTTTCAATGGCTGTAATTCAAGCTAATAGCTCTTTGGAGGATCATAGTCAGCTTGAATCTGGACCGTTGAGTTCGGATTATTTGGGTCCTCAAGGAACCTTTGTTGGTGTTTATGATGGTCATGGTGGACCTGCAGCATCCAAGTTTGTCAATGATAATCTTTTCTCCAATTTCAAGAGTTTTGCAGCGGAAGAACAAGGCGTATCGGAAAAGGTAATAAAGAGGGCATTTTCTGCAACAGAAGACGATTTTCTGGCTCTTGTGAAGAAGCAATGGCTAACGAAACCACAGATAGCATCTTCAGGCACATGTTGTTTGGCCGGGATAATTTGCAATGGCATGCTGTATGTTGCAAATGCAGGAGATTCACGAGCTGTGTTAGGAAGAGTGAAGAAGGGAACAAAGGAAACATTAGCTGTTCAGTTATCTGCAGAACATAATGTCAACATAGAAACTGAGAGAAATGATGTTAGGTTAAAGCATCCTTATGATCCACAGATTGTGGTTATGAAACACTCGGTTTGGCGCGTGAAAGGCATCATACAGGTTTCAAGATCCATAGGTGATGCATATCTAAAGAAAGCCGAATTTAACACGGAGCCTCTGCCACAAAAGTTTAGACTAGCCGAAACCTTTTTCAAGCCGATTCTTAGTAGTGAACCATCGGTATCGATTCATAAAATCCAACCGGAAGATCAATTTCTCATCTTTGCTTCTGATGGTTTATGGGAGCATCTTAGCAACCAAGCAGCTGTCAATATAGTTAGCAACAATCCACGCAACGGAATAGCACGGAGACTTGTGAAAGCAGCGCTTAAAGAAGCAGCTAAGAAAAGAGAGATAAGATTGTCAGATCTTCAGAAGATCGAACAAGGAGTTAGGAGACATTTTCATGACGATATTACAGTAATCGTTGTATATCTAAATCGTAAACTGATCGATAACAGCTCTCTATGTAGTTCTCCTCTTTCAATCAAAGGTGGTAGGCATGTCAATTTTTAG 1089 0.4077 MTISCWKPSVERDDGLLWYKDLGNHLYGEFSMAVIQANSSLEDHSQLESGPLSSDYLGPQGTFVGVYDGHGGPAASKFVNDNLFSNFKSFAAEEQGVSEKVIKRAFSATEDDFLALVKKQWLTKPQIASSGTCCLAGIICNGMLYVANAGDSRAVLGRVKKGTKETLAVQLSAEHNVNIETERNDVRLKHPYDPQIVVMKHSVWRVKGIIQVSRSIGDAYLKKAEFNTEPLPQKFRLAETFFKPILSSEPSVSIHKIQPEDQFLIFASDGLWEHLSNQAAVNIVSNNPRNGIARRLVKAALKEAAKKREIRLSDLQKIEQGVRRHFHDDITVIVVYLNRKLIDNSSLCSSPLSIKGGRHVNF 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04276 362 SUPERFAMILY PP2C-like 57 338 IPR036457 -
Vivi6g04276 362 CDD PP2Cc 27 337 IPR001932 -
Vivi6g04276 362 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Vivi6g04276 362 PANTHER PROTEIN PHOSPHATASE 27 336 IPR015655 GO:0004722|GO:0006470
Vivi6g04276 362 Gene3D - 20 346 IPR036457 -
Vivi6g04276 362 Pfam Protein phosphatase 2C 60 306 IPR001932 -
Vivi6g04276 362 ProSiteProfiles PPM-type phosphatase domain profile. 26 337 IPR001932 -
Vivi6g04276 362 SMART PP2C_4 23 335 IPR001932 -
Vivi6g04276 362 FunFam Phosphatase 2C family protein 18 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04276 Vivi-Chr6 142624918 142627564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04276 1 357 PP2C-type Phosphatase Gene Family AT3G12620 66.033 0.0 506