Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04263 ATGATTATTGACTCACCCATGCATGCAATGTCTGCCTTACAGCCCACGCCTCCTAAACCAGTCTCCCACCACGACATGCTTCCTTTCTTCAACCAATCTATGGAACTTGTTCCTAGTCCCCTCAAAACACGACGAGCCCTTCACTCTCCTACACTCGGTGAACTCCTTAAACGCGTCGAAGATGCTCAAAACGACAACAATAATGCTCAACCACACCATGTTCTCGACCTCTCTTCCCCTTCTTCTTCCACCACTCTTCCCCCACCTTTTTTCCTTTCTTTCACTAACTTGACTTACAGCGTCAAGCTAGACAGAAAGTTGACATGCTTTTCTTTCAATCAAAATTCTCTTCCAACGGATCATGAAACCGAAACCAAACCAAATGGCACCAAGATCCTCCTCAACAACATCTCCGGTGAAGCAAGAGACGGAGAAATCATGGCAGTTCTCGGCGCAAGTGGCTCCGGAAAATCAACTCTCATTGATGCTCTCGCAGACAGAATCTCCAAAGAGTCTCTCAAAGGGACTATAACTCTAAACGGAGATATCTTGGAGTCAAGTCTCCAGAAGGTGATTTCAGCTTATGTCATGCAAGATGACCTTCTCTTCCCCATGCTCACCGTGGAAGAAACTCTTATGTTCTCGGCCGAGTTCAGACTCCCTCGCTCTCTCTCGAAATCAAAGAAAAAGGCTCGCGTCCAAGCTCTCATCGACCAGCTTGGTCTCCGCAACGCTGCCTCAACCGTCATAGGAGACGAAGGCCACCGCGGTGTTTCAGGTGGAGAACGCCGCCGTGTCTCGATCGGCACAGACATCATCCACGATCCAATCATTTTATTCTTAGATGAACCAACCTCCGGACTTGACTCCACCAGCGCATACATGGTGGTTAAGGTCTTACAGCGAATTGCTCAAAGCGGGAGTATCGTCATGATGTCAGTTCATCAACCAAGCTACAGAATCCTCGGATTGTTAGACCGTTTGATCTTCCTCTCTCACGGCCAAACCGTCTACAGCGGTTCTCCGGCGAGCCTCCCTAGTTTTTTCTCCGAGTTCGGTCATCCTATACCGGAAAACGAGAACCGAACGGAATTCGCACTGGACCTAATACGCGAGCTTGAAGAAACTCCGGGAGGAACCAAAGGTCTTGTGGAGTTCAACAAAACATGGCAGTTGAAAAATCAGCCACTCTCCGTAAACGTTAATAACGGATCTAAACTGTCGTTAAAAGACGCCATCAGCGCAAGTATCTCAAGAGGAAAATTAGTCTCAGGAACTAACGGAGGAAACGGAAACGGAAACTCAACCGCTTCAGTTGCCACGTTTGCTAACCCGTTTTGGATTGAAATGGCGGTTATCGGAAAACGTTCTCTAACAAACTCACGTCGGATGCCGGAATTATTCGGAATCCGATTAGGTGCAATTCTGGTCACCGGAGGAATCTTAGCCACTATCTTCTACCATCTTGACAACTCACCAAAAGGTGTTCAAGAACGTTTAGGTTTCTTCGCCTTCGCCATGTCAACAACCTTCTACACTTGCGCAGAAGCCATTCCCGTTTTCCTCCAAGAGCGTTACATCTTCATGAGAGAAACAGCTTACAACGCTTACCGTCGTTCCTCTTACGTCCTCGCTCACTCCATCATCTCCCTCCCCGCACTAGTCTTCCTCTCCTTCACATTCGCCGTCACAACCTTCTGGTCGGTCGGCCTCGCAGGCGGGACATCTGGTTTTTTGTTCTACTTTTTAACCATTTTAGCTTCTTTCTGGGCAGGGAGTTCCTTCGTGACGTTCCTCTCCGGCGTAGTCTCTCATGTGATGCTTGGTTTTACCGTCGTGGTTGCGATAATGGCCTACTTTCTTCTCTTCAGCGGATTCTTCATCAGCAGAGACAGAATTCCACCTTACTGGATATGGTTCCATTACCTGTCACTAGTGAAGTACCCTTATGAAGGAGTTCTTCAGAATGAGTTTGCTATTAACCCACCAAGATGCTTTGTGAGAGGGATTCAGATGTTCGATAACACGCCGCTCGGTGATGTTCCGGGGAGTTTGAAGGTGGAGCTGTTGAAGAGCATGAGCAGGACGCTTGGGATTACTATAACGAGCGACACTTGTGTTGTTACTGGAGAAGATGTACTGAAGCAGCAGGGGATCACGCAGCTTAGTAAATGGAATTGCTTGTACATTACTATTGCTTGGGGTTTCTTCTTTCGCTTCCTCTTTTACTTGGCGTTGCTTTTTGGAAGCAGGAACAAAAGGAAATAA 2268 0.4762 MIIDSPMHAMSALQPTPPKPVSHHDMLPFFNQSMELVPSPLKTRRALHSPTLGELLKRVEDAQNDNNNAQPHHVLDLSSPSSSTTLPPPFFLSFTNLTYSVKLDRKLTCFSFNQNSLPTDHETETKPNGTKILLNNISGEARDGEIMAVLGASGSGKSTLIDALADRISKESLKGTITLNGDILESSLQKVISAYVMQDDLLFPMLTVEETLMFSAEFRLPRSLSKSKKKARVQALIDQLGLRNAASTVIGDEGHRGVSGGERRRVSIGTDIIHDPIILFLDEPTSGLDSTSAYMVVKVLQRIAQSGSIVMMSVHQPSYRILGLLDRLIFLSHGQTVYSGSPASLPSFFSEFGHPIPENENRTEFALDLIRELEETPGGTKGLVEFNKTWQLKNQPLSVNVNNGSKLSLKDAISASISRGKLVSGTNGGNGNGNSTASVATFANPFWIEMAVIGKRSLTNSRRMPELFGIRLGAILVTGGILATIFYHLDNSPKGVQERLGFFAFAMSTTFYTCAEAIPVFLQERYIFMRETAYNAYRRSSYVLAHSIISLPALVFLSFTFAVTTFWSVGLAGGTSGFLFYFLTILASFWAGSSFVTFLSGVVSHVMLGFTVVVAIMAYFLLFSGFFISRDRIPPYWIWFHYLSLVKYPYEGVLQNEFAINPPRCFVRGIQMFDNTPLGDVPGSLKVELLKSMSRTLGITITSDTCVVTGEDVLKQQGITQLSKWNCLYITIAWGFFFRFLFYLALLFGSRNKRK 755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04263 755 SMART AAA_5 143 358 IPR003593 GO:0016887
Vivi6g04263 755 FunFam ABC transporter G family member 6 123 349 - -
Vivi6g04263 755 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 127 350 IPR027417 -
Vivi6g04263 755 Pfam ABC-2 type transporter 315 394 IPR043926 GO:0140359
Vivi6g04263 755 Pfam ABC transporter 134 286 IPR003439 GO:0005524
Vivi6g04263 755 Gene3D - 122 349 IPR027417 -
Vivi6g04263 755 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 117 358 IPR003439 GO:0005524
Vivi6g04263 755 ProSitePatterns ABC transporters family signature. 258 272 IPR017871 GO:0005524|GO:0016887
Vivi6g04263 755 Pfam ABC-2 type transporter 452 658 IPR013525 GO:0016020|GO:0140359
Vivi6g04263 755 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 66 743 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04263 Vivi-Chr6 142370453 142373024 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04263 133 318 Calmodulin-binding Proteins AT2G36910 29.101 2.47e-10 62.4