Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04253 ATGGTTGTGTTCAAAAATTTGCTGGGTGTTACAAACAAGCTGTTCATGGAAAAAAAAAGTGGGGCATCAGAGAAAGATATCTTAATCAATGCGCATGCTTTTTATGAACAAGATGAAGGTGCACCATTCAATCTTGAGTATGCATGGCGGCTTTTAAAAGATGAACCTAAATGGATGGGAACATTCACCGAAAATTCTTCAAAGAGAACAAAGAATTCTGCTAGTGGTTCATACACAGCATCGCTAAACTCAGAGACACCTTCAAGTTATGAGTTAAACTCATCATCTCCAATGGAGCGTCCAATGGGACAAAAGGCGGCAAAACGAAAAGGTAAGGCAAAGGAAAATGCAACTGAACCTCCTTCTAGTGTTATTTCCGATACAAGGAATAAAAGAATGGAAGTAATGGAAAATCTAGCACGACTTAAGGAGGAAGAAAACAAATTAGTCAAGGAAAAGATGGAGTTTGAAGCAATGCAATTCATAATGTCAGACACTTCTAAGATGAATGATAGTCAACGTGAATTTCATGAAAAACGTTGTAATAACCTAAAAGAAAAATATGGATGGTAA 573 0.3682 MVVFKNLLGVTNKLFMEKKSGASEKDILINAHAFYEQDEGAPFNLEYAWRLLKDEPKWMGTFTENSSKRTKNSASGSYTASLNSETPSSYELNSSSPMERPMGQKAAKRKGKAKENATEPPSSVISDTRNKRMEVMENLARLKEEENKLVKEKMEFEAMQFIMSDTSKMNDSQREFHEKRCNNLKEKYGW 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04253 190 Coils Coil 125 159 - -
Vivi6g04253 190 MobiDBLite consensus disorder prediction 61 100 - -
Vivi6g04253 190 MobiDBLite consensus disorder prediction 61 131 - -
Vivi6g04253 190 PANTHER - 12 186 - -
Vivi6g04253 190 Pfam No apical meristem-associated C-terminal domain 42 179 IPR029466 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04253 Vivi-Chr6 142195736 142196308 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04253 7 146 Glutathione S-transferase Gene Family AT5G41240 32.877 4.71e-14 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04253 - - vvo:131607299 323.939