Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04241 ATGGAGAGTTCTCTACTCTTCTTCTTTCTCTCCTTCACAACTTCACTCTTTCTCCTTCCCCCTTTTTCATCTTCTCAGATCATGCAAGGTTTTGTAAGTTTGGACTGTGGAGGGACAGAAAGTTTCACCGATGAAATAGGTCTTGATTGGACTCCTGATAATAAGCTTACATATGGAGAAATAGCCACTATATCTGTTGCGAACGAGACGCGGAAGCAATACACGACGTTACGATACTTTCCTGCTGATTCTAGGAAATATTGCTACACTCTTGATGTTATTAGTAGGACGAGGTATTTGTTAAGGGCGACTTTCTTGTATGGAAATTTTGATAAAAACAATGTTTATCCTAAGTTTGATATTTCTGTTGGAGCTACTCATTGGTCGACGATTGTTATATCGGATGCTGATAGTGTAGAAATGAGAGAGCTTATATTTTTGGCTTCGAGTTCGACTGTGAGTGTGTGTTTATCGAATGCAACAACGGGGCAGCCGTTTCTATCTACGCTTGAGCTTCGACAATTCAATGGTTCGGTTTATTTTACTGAGTTTGAGAAACAATTTTACCTGAGTGTCTCTGCAAGGATCAATTTTGGTGCAGAGAGTGATGCTCCAATCAGGTACCCTGATGATCCTTTTGATAGAATTTGGATGTCGGATTCTGTTAAGAAAGCAAATTATCTCGTTGATGTTGCTGCTGGCACCGAGAAAATTTCTACCAATGAACCAATTTTTGTTAACCGAGATGATATACCACCGATGAAAGTGATGCAGACAGCGGTAGTAGGTACAAATGGATCTCTAACTTACCGGTTGAATTTGGATGGTTTTCCTGGCACTGCTTGGGCAGTCACCTATTTTGCAGAGATTGAAGATTTGCGTCCAACTGAGTCTAGAAAATTCAGGCTTATGCTTCCAGGCCAGCCCGAAATTAGCAAGATCATTGTAAATATTGAAGAAAATGCTTTTGGGAAATATCGCCTTTATGAACCGGGATTTGTCAATCTAACCCTACCTTTTGTGCTTTCCTTTAAATTCGGCAAGACAACTGATTCGTCCAAGGGGCCTCTCCTTAATGCCATGGAGATAAATAAGTATCTTGAGAAAAATAATGGTTCACCGGATGTTGAAGCTATTTCGGGAGTGCTTTCTCGCTACTCTTCAGCAAACTGGACTCAAGAAGGAGGTGATCCATGTCTTCCTGTTTCCTGGTCATGGATCCACTGTAGCTCAGATCCACAACCAAGAATAATTTCAATCTTGTTATCCAGTAAAAACTTGACTGGGAATATTCCTTCAGATATTACCAAATTGGTTGGTCTGGTTGAACTATGGCTTGATGGAAATATGTTGACCGGCCCAATACCCGATTTTACTGGGTGCACGGACTTAAAGATCATCCATCTTGAAAATAATCAGTTCACCGGTGAGCTCCCAGCCTCCTTGGTGAATCTTCCGAGTTTGAGGGAACTATATGTTCAAAATAATATGCTATCTGGAGCAGTACCGCCAGAGCTTCTAAGCAAGAATTTGGTTTTAAATTACTCCGGAAACATTAACCTACATAAAGGAAGCAAAACAAAGAGCCACATATATATTATTATTGGTTCAGCAGTTGGGGCTTCTGTTCTACTTTTGGCTACTGTTATATCTTGCTTGGTTATGCATAAAGGCAAGAAAAAATATTATGAGAAAGGTAGGGTTCTAAGCACAATTGTTTCTTTCGCTGTCAGATATTTGTGGCGACCAAACATGATTTACTTGTTTACATTCTTTTTAGACCACATAGTTTCTGTCCCTACTCAAAGGCCGGCTTCTTGGAAGAGTGATGATCCTGCAGAATCGGCTCACTGCTTCAGCTTAGCTGAAATTGAAAGTGCTACAAACAACTTTGAGAAAAGAATCGGTTCTGGTGGTTTTGGAATTGTATACTATGGAAAACTGAAAGAAGGAAAAGAGATAGCAGTTAAAGTTCTTAGGAACAATTCCTATCAAGGCAAGCGCGAGTTCTCCAATGAGGTGACTCTTCTATCAAGAATACATCACAGAAACTTGGTACAACTTCTTGGGTATTGTCGAGAAGAAGATAATAGTATTCTCGTGTACGAGTTCATGCATAATGGCACACTCAAGGAACATCTCTATGGCCCTTTAGTGCACGGACAAAGTATAAGTTGGATTAAACGCCTTGAGATTGCAGAAGACTCTGCCAAAGGAATTGAATACCTTCATACAGGTTGTGTTCCTGTAGTTATTCATAGAGACTTGAAAAGTAGCAATATTCTTCTTGACACACACATGAGAGCCAAGGTTTCAGATTTCGGTCTTTCCAAACTCGCTGTTGATGGAGTCTCCCATGTTTCAAGCATAGTTCGCGGAACAGTAGGATACCTGGATCCTGAGTACTATATTTCCCAACAACTAACTGACAAGAGCGATGTGTATAGCTTTGGTGTAATTCTTCTAGAACTCATATCTGGTCAAGAAGCAATATCAAATGAAAGTTTCGGGATTCATTGCCGAAACATAGTCCAATGGGCAAAATTGCACATTGAGAGTGGGGATATACAAGGCATCATTGATCCCTTACTAGGAAACAACTATGACCTACAATCAATGTGGAAAATAGCAGAGAAAGCATTGATGTGTGTTCAACCTCATGGAGATATGCGTCCATCGATCTCGGAAGTTTTAAAGGAGATCCAAGATGCAATATCTATTGAGAGAGAAGCTGAAACATCGCGAGAATGCAATTCTGATGAGGTTTCAAAAAATTCTTTTCATTCTTCCATGAACATAGGTTCAATGGATCTCGGTAGAGTTGAGAGTTTCCTTTCAATCGATGAATCGATTGCGCAACCTACTGCAAGATAG 2874 0.4015 MESSLLFFFLSFTTSLFLLPPFSSSQIMQGFVSLDCGGTESFTDEIGLDWTPDNKLTYGEIATISVANETRKQYTTLRYFPADSRKYCYTLDVISRTRYLLRATFLYGNFDKNNVYPKFDISVGATHWSTIVISDADSVEMRELIFLASSSTVSVCLSNATTGQPFLSTLELRQFNGSVYFTEFEKQFYLSVSARINFGAESDAPIRYPDDPFDRIWMSDSVKKANYLVDVAAGTEKISTNEPIFVNRDDIPPMKVMQTAVVGTNGSLTYRLNLDGFPGTAWAVTYFAEIEDLRPTESRKFRLMLPGQPEISKIIVNIEENAFGKYRLYEPGFVNLTLPFVLSFKFGKTTDSSKGPLLNAMEINKYLEKNNGSPDVEAISGVLSRYSSANWTQEGGDPCLPVSWSWIHCSSDPQPRIISILLSSKNLTGNIPSDITKLVGLVELWLDGNMLTGPIPDFTGCTDLKIIHLENNQFTGELPASLVNLPSLRELYVQNNMLSGAVPPELLSKNLVLNYSGNINLHKGSKTKSHIYIIIGSAVGASVLLLATVISCLVMHKGKKKYYEKGRVLSTIVSFAVRYLWRPNMIYLFTFFLDHIVSVPTQRPASWKSDDPAESAHCFSLAEIESATNNFEKRIGSGGFGIVYYGKLKEGKEIAVKVLRNNSYQGKREFSNEVTLLSRIHHRNLVQLLGYCREEDNSILVYEFMHNGTLKEHLYGPLVHGQSISWIKRLEIAEDSAKGIEYLHTGCVPVVIHRDLKSSNILLDTHMRAKVSDFGLSKLAVDGVSHVSSIVRGTVGYLDPEYYISQQLTDKSDVYSFGVILLELISGQEAISNESFGIHCRNIVQWAKLHIESGDIQGIIDPLLGNNYDLQSMWKIAEKALMCVQPHGDMRPSISEVLKEIQDAISIEREAETSRECNSDEVSKNSFHSSMNIGSMDLGRVESFLSIDESIAQPTAR 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04241 957 Pfam Malectin-like domain 34 364 IPR024788 -
Vivi6g04241 957 ProSiteProfiles Protein kinase domain profile. 629 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g04241 957 PANTHER OS07G0107800 PROTEIN-RELATED 32 905 - -
Vivi6g04241 957 Gene3D Ribonuclease Inhibitor 377 530 IPR032675 -
Vivi6g04241 957 Pfam Protein tyrosine and serine/threonine kinase 631 831 IPR001245 GO:0004672|GO:0006468
Vivi6g04241 957 SUPERFAMILY Protein kinase-like (PK-like) 614 902 IPR011009 -
Vivi6g04241 957 FunFam Leucine-rich repeat receptor-like protein kinase 607 704 - -
Vivi6g04241 957 SMART serkin_6 629 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi6g04241 957 FunFam Leucine-rich repeat protein kinase family protein 376 528 - -
Vivi6g04241 957 SUPERFAMILY L domain-like 401 518 - -
Vivi6g04241 957 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Vivi6g04241 957 Gene3D Transferase(Phosphotransferase) domain 1 705 929 - -
Vivi6g04241 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Vivi6g04241 957 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 705 914 - -
Vivi6g04241 957 Gene3D Phosphorylase Kinase; domain 1 603 704 - -
Vivi6g04241 957 CDD STKc_IRAK 635 902 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04241 Vivi-Chr6 142023845 142028791 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04241 23 739 Receptor kinase-like Gene Family AT2G37050 66.064 0.0 973
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Vivi6g04241 Malectin_like 8.2e-78 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04241 - - vvo:131610279 1887.46