Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04211 ATGGCTGATGATTCTGAATTCGCCGGTAAAGTTCCTCCGAATGCTGGTTCTCAAGGGTTCAACCCAGGCTTAATAGTTCTACTTGTTGTTGGAGGGTTGCTATTGACCTTCCTGATTGGAAACTTTGTGCTCTACACTTACGCACAGAAGGTCATTCCTCCTAGGAAAAAGAAGCCTGTCTCAAAGAAGAAGATGAAAAAGGAGAGACTGAGGCAAGGAGTCTCTGCACCTGGAGAGTAG 240 0.4583 MADDSEFAGKVPPNAGSQGFNPGLIVLLVVGGLLLTFLIGNFVLYTYAQKVIPPRKKKPVSKKKMKKERLRQGVSAPGE 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04211 79 MobiDBLite consensus disorder prediction 1 21 - -
Vivi6g04211 79 Pfam DNA binding protein S1FA 16 79 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vivi6g04211 79 PANTHER DNA-BINDING PROTEIN S1FA2 10 79 IPR006779 GO:0003677|GO:0005634|GO:0006355
Vivi6g04211 79 MobiDBLite consensus disorder prediction 55 69 - -
Vivi6g04211 79 MobiDBLite consensus disorder prediction 54 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04211 Vivi-Chr6 141634725 141636183 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF S1Fa-like Vivi6g04211 S1FA 1.8e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04211 - - gmx:100500059 120.168