Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi6g04154 ATGGAAGTTACAAAGAAGTTGAAGCTAAAGAGTTTGATATCAAAGGTGCTAAAGGGTGTTCTTTTTTTGGAAAGAAGTAAAGCGTATGCAAGAAGATGTGATTATGTGAGAGTTAGAAGCATTGGTGATGATGATGATAGTGAGAGTGAAGAAAGAGCAACAAGAGTGCCTGAAGGTTATTTTGTTGTTGTAGCAATGCATGGTGAAGAAAGAAAGAGATTTGTTCTTAGGTTGGAATATTTAAGAGATGCTCGATTCATGAAACTGTTGGAGGAAGCTAAGGAAGAGTTTGGTTATGAACAAGAGGGTGCTATTGCTGTTCCTTGTAGGCCTCAAGAGCTTGAAAAGATTATAGAGAATAGGCACAATGCCACTTTGTAA 381 0.3753 MEVTKKLKLKSLISKVLKGVLFLERSKAYARRCDYVRVRSIGDDDDSESEERATRVPEGYFVVVAMHGEERKRFVLRLEYLRDARFMKLLEEAKEEFGYEQEGAIAVPCRPQELEKIIENRHNATL 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi6g04154 126 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 42 117 IPR003676 GO:0009733
Vivi6g04154 126 Pfam Auxin responsive protein 37 119 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi6g04154 Vivi-Chr6 140546860 140547666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi6g04154 42 109 Calmodulin-binding Proteins AT5G20810 41.429 3.34e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi6g04154 - K14488 gmx:102661602 114.005
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi6g04154 6 140546860 140547666 Vivi6g04154 6 140546860 140547666 ECH
Vivi6g04154 6 140546860 140547666 Vivi1g06994 1 167516292 167516851 PCT